Helicobacter pylori Shi112: HPSH112_03335
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Entry
HPSH112_03335 CDS
T02037
Name
(GenBank) hypothetical protein
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hhp
Helicobacter pylori Shi112
Brite
KEGG Orthology (KO) [BR:
hhp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hhp03009
]
HPSH112_03335
Enzymes [BR:
hhp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HPSH112_03335
Ribosome biogenesis [BR:
hhp03009
]
Prokaryotic type
ribosomal protein modification factors
HPSH112_03335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Rotavirus_VP3
CLP1_P
DUF2981
Oxidored_nitro
Motif
Other DBs
NCBI-ProteinID:
AFI00879
LinkDB
All DBs
Position
662978..664297
Genome browser
AA seq
439 aa
AA seq
DB search
MQIKENKQLCLISLGCSKNLVDSEVMLGKLYNYTLTNDTKSADVILINTCGFIESAKQES
IQTILNAAKDKKKGAILIASGCLSERYKDEIKELIPEVDIFTGVGDYDKIDIMIAKKQNQ
FSEQVFLSEHYNARIITGSSVHAYVKISEGCNQKCSFCAIPSFKGKLQSRELDSILKEVQ
DLALKGYTDMTFIAQDSSSFLYDKGQKDGLIQLIKAIDKQQALKSARILYLYPSSTTLEL
IGAIESSPIFQNYFDMPIQHISDSMLKKMRRNSSQAHHLKLLNAMKQVKESFIRSTIIVG
HPEENEGEFEELSAFLDEFRFDRLNIFAFSAEENTHAYSLEKVPKKIINARIKALNKIAL
KHQNNSFKALLNKPIKALVENKEGEYFYKARDLRWAPEVDGEILINDSELATPLKPGHYT
IMPSAFKDNILLAKVLSPF
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattaaagaaaacaaacaactctgcttaatttcattaggttgctctaaaaatttg
gtggattcagaagtgatgttaggcaagctttataactacacgctcactaatgatactaag
agcgctgatgtgattttgattaatacttgcggttttattgaaagcgccaagcaagaaagc
atccaaaccattctaaacgccgctaaagacaaaaaaaagggggcgattttgattgcgagc
gggtgcttgagcgagcgctataaagatgaaatcaaagaattgatccctgaagtggatatt
tttaccggtgtgggggattatgacaagattgatataatgattgctaaaaaacaaaaccag
ttcagcgaacaagtgtttttaagcgagcattataacgcgcgcatcatcacgggatcgagc
gtgcatgcgtatgttaaaatttctgagggttgcaatcaaaaatgctctttttgcgctatc
cctagctttaaggggaaattacaaagcagggaattagactccattttaaaagaagtgcaa
gatctcgcgcttaaaggctatacggatatgacttttatcgctcaagattctagctccttt
ttatacgataaggggcaaaaagacggcttgatccagcttatcaaggcgattgacaaacag
caagccttaaagagcgcgcgaatcttatacctctacccttctagcaccacgctagagctt
attggcgcgattgaaagttcgcccatttttcaaaattattttgacatgcccatccagcat
atcagcgactccatgcttaaaaaaatgcggcgcaactccagccaagcgcaccatttaaag
cttttaaatgccatgaagcaggttaaagaaagctttatcagaagcacgatcattgtaggg
catccggaggaaaatgagggcgaatttgaagaattgagcgcgtttttggacgagttccgg
tttgaccggttgaatatctttgctttcagcgctgaagaaaacacgcatgcctattcttta
gagaaagtgcctaaaaaaatcatcaacgctcgcatcaaagccttgaataaaatcgctcta
aaacaccaaaacaattcctttaaggctttgttaaataagcccattaaggcgttagtggaa
aataaagagggcgagtatttttacaaagcaagggatttgagatgggcgcctgaagtggat
ggggaaatcttaatcaatgacagcgaactagccacccctttaaaacccgggcattatacg
atcatgcctagcgcatttaaagacaatatcttactcgctaaggttttaagccctttttaa
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