Helicobacter pylori Shi112: HPSH112_03515
Help
Entry
HPSH112_03515 CDS
T02037
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hhp
Helicobacter pylori Shi112
Brite
KEGG Orthology (KO) [BR:
hhp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhp03032
]
HPSH112_03515
03400 DNA repair and recombination proteins [BR:
hhp03400
]
HPSH112_03515
Enzymes [BR:
hhp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HPSH112_03515
DNA replication proteins [BR:
hhp03032
]
Prokaryotic type
DNA Topoisomerases
HPSH112_03515
DNA repair and recombination proteins [BR:
hhp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPSH112_03515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Retrotran_gag_2
CsgA
Motif
Other DBs
NCBI-ProteinID:
AFI00907
LinkDB
All DBs
Position
complement(695340..697820)
Genome browser
AA seq
826 aa
AA seq
DB search
MQDNLINETKNIVEVGIDSSIEESYLAYSMSVIIGRALPDARDGLKPVHRRILYAMHELG
LTSKVAYKKSARIVGDVIGKYHPHGDNAVYDALVRMAQDFSMRLELVDGQGNFGSIDGDN
AAAMRYTEARMTKASEEILRDIDKDTIDFVPNYDDTLKEPDILPSRLPNLLVNGANGIAV
GMATSIPPHRIDEIIDALVHVLENPNAGLDEILEFVKGPDFPTGGIIYGKAGIIEAYKTG
RGRVKVRAKVHVEKTKNKEIIVLDEMPFQTNKAKLVEQISDLAREKQIEGISEVRDESDR
EGIRVVIELKRDAMSEIVLNHLYKLTTMETTFSIILLAIYNKEPKIFTLLELLRLFLNHR
KTIIIRRTIFELEKAKARAHILEGYLIALDNIDEIVRLIKTSQSPEAAKDALMERFTLSE
IQSKAILEMRLQRLTGLERDKIKEEYQNLLELISDLNGILKSEDRLNKVVKTELLEVKEQ
FSSQRRTEIQEVYENIDIEDLIANEPMVVSMSYKGYVKRVDLKAYERQNRGGKGKLSGNT
YEDDFIENFFVANTHDILLFITNKGQLYRLKVYKIPEASRIAMGKAIVNLISLAPDEKIM
ATLSTKDFSDERSLAFFTKKGVVKRTNLSEFDSNYNGMRAIVLDEGDELVSAKIVDKNAK
HLLIASYLGLFIKFPLEDVREIGRSTRGVRGIRLNENDFVVGAVVINDDSNKLLSVSENG
LGKQTLAEAYREQSRGGKGIIGMKLTQKTGNLVSVISVDDENLDLMILTASAKMIRVSIK
DIKETIGRNTSGVKLIDTADKVVYANSCPKEEEPENLENPPTQLFE
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataatttaatcaatgaaacaaaaaatattgtagaagtggggattgattcttct
attgaagaaagctatttagcttattcaatgagcgtgatcatagggcgcgctttaccggac
gctagagatggcttaaagcccgtgcataggcgtattttgtatgcgatgcatgaattaggc
ctcacttccaaagtcgcttataaaaaaagcgctaggatcgtgggtgatgtgattggtaaa
taccacccccatggcgataacgcggtttatgatgcgctagtaagaatggcgcaagatttt
tctatgcgtttggaattagtggatgggcaaggcaactttggctctattgatggcgataac
gctgcggcgatgcgttacactgaagccagaatgaccaaggcgagtgaagaaattttaagg
gatattgataaagacaccattgattttgtgcctaattacgatgacaccttaaaagagccc
gatattttaccaagccgtctgcctaaccttttagtcaatggggctaatgggatcgctgta
gggatggcgacttctatcccccctcacaggattgatgaaatcatagacgctttagtgcat
gtcttagaaaaccctaacgctggattagatgaaattttagaatttgtcaaagggcctgac
tttcccactggcgggatcatttatggcaaggcgggtattattgaagcctataaaacgggg
cgagggcgcgtgaaagtgcgcgccaaagtgcatgtggaaaagacgaaaaataaagaaatc
atcgttttagatgaaatgccttttcaaaccaataaagccaaattagtggaacaaatcagc
gatttagcgcgagaaaaacaaattgaaggcattagcgaagtgcgcgatgagagcgataga
gagggcattagagtggtgattgaattaaaaagagatgcgatgagtgaaattgtcttaaac
cacctctacaaactcaccaccatggagaccacttttagcatcattttactcgctatttac
aataaagagcctaagattttcacgcttttagagttgttgcgcctttttttaaaccacaga
aaaaccattattataagacgcactatttttgaattagagaaggctaaagctagagcgcat
attttagagggctatttgatcgcattagacaatattgatgaaatcgtgcgactcattaaa
acaagccaaagcccagaagcggctaaagacgccttaatggagcgttttactttgagcgaa
atccagagcaaagccattttagaaatgcgtttgcagcgcttaacaggccttgaaagagat
aaaatcaaagaagaataccaaaacttgttagagcttattagtgatctcaatggcatttta
aagagcgaagatcgcttgaataaagtcgtcaaaacagagcttttagaagtcaaagagcaa
ttttcctctcaaaggcgcactgagattcaagaagtttatgaaaatattgacatagaagat
ttgatcgctaatgagcctatggtggtgagcatgagctataaaggctatgtgaaaagagtg
gatttgaaagcttatgaaaggcaaaatcgtggcggtaagggcaagctttcaggcaacact
tatgaagacgatttcattgaaaacttttttgtggctaacacgcatgatattttgctcttt
atcaccaacaaggggcagttgtatcgtttgaaagtctataagatcccagaagcgagccgg
atcgctatgggtaaagccatcgtgaatttaatctcgctcgctcctgatgaaaagatcatg
gcgactctaagcaccaaagactttagcgatgaacgctctttagctttcttcaccaaaaaa
ggtgtggtgaagcgcaccaacttgagcgaatttgacagcaactataacggtatgagagcg
attgttttagatgagggcgatgaattggtgagcgcaaaaattgtggataaaaacgctaaa
catttgctcatcgcatcgtatttgggccttttcattaaattccctttagaagatgtgcgc
gagatcggaagaagcactcgtggggttagagggattagattgaatgaaaatgattttgtt
gtcggtgcggtcgttattaacgatgacagcaacaagcttttgagcgtgagtgaaaacggg
cttggcaagcaaactttagccgaagcgtatagagagcaatctcgtggaggtaaggggatc
attggcatgaagctcactcaaaaaaccggcaatctagtgagcgttatcagcgtggatgat
gaaaacctggatttgatgatccttaccgcaagcgcgaaaatgatcagagtttctattaaa
gacattaaagaaaccatcggaagaaataccagtggggtaaaactcatagacactgccgat
aaagtcgtgtatgccaattcttgccccaaagaagaagagccagaaaatttagaaaaccct
cccacacaattgtttgagtga
DBGET
integrated database retrieval system
