Helicobacter pylori Shi112: HPSH112_03545
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Entry
HPSH112_03545 CDS
T02037
Name
(GenBank) putative outer membrane protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
hhp
Helicobacter pylori Shi112
Pathway
hhp00540
Lipopolysaccharide biosynthesis
hhp01100
Metabolic pathways
Module
hhp_M00867
KDO2-lipid A modification pathway
Brite
KEGG Orthology (KO) [BR:
hhp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HPSH112_03545
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hhp01005
]
HPSH112_03545
Lipopolysaccharide biosynthesis proteins [BR:
hhp01005
]
Lipid A
HPSH112_03545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
AFI00913
LinkDB
All DBs
Position
complement(704730..705731)
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AA seq
333 aa
AA seq
DB search
MFFKFILCLLLGMFAWAKEDILTPLTPSKRYSINLMTENDGYINPYIDEYYTAGNQIGFS
TKEFDFSKNKAMKWTSYLGFFNKSPRVTRFGISLAQDMYTPSLENRKLVHLHDNHPYGGY
LRVNLNVYNRHQTFMELFTLSLGTTGQDSLAAQTQHLIHKWGHDPQFYGWNTQLKNEFIF
ELHYQLLKKVPLLKTRFFSMELMPGFNVELGNARDYFQLGSLFRAGYNLDADYGVNKVNT
AFDGGMPYSDKFSIYFFVGAFGRFQPLNIFIQGNSPETRGIANLEYFVYASEIGAAMMWR
SFRVAFTITDISKTFQSQPKHHQIGTLELNFAF
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
ttgtttttcaaatttattttatgtttattattaggaatgtttgcatgggcaaaagaggat
attcttaccccattaacgccctctaaacgctattctatcaatttgatgactgaaaatgat
ggttatatcaacccttacattgatgagtattataccgcaggcaatcaaataggcttttct
actaaagagtttgatttttctaaaaataaagcgatgaaatggacttcgtatttagggttt
ttcaataaaagccctagggttactcgttttggcatttctctcgcccaagacatgtatacc
ccttcacttgaaaacagaaaactggtgcatttgcatgacaaccacccttatggggggtat
ttgagggtgaatttgaatgtgtataaccgccatcaaactttcatggagttattcacgctt
tctttaggaacgacagggcaagattctttggccgctcaaacgcagcatctcattcataaa
tggggtcatgacccccaattttatggctggaacacgcagctcaaaaacgaatttatcttt
gaattgcactaccaattgctcaaaaaagtcccccttttaaagactcgttttttttctatg
gagttaatgcctgggtttaatgtggaattgggtaatgcgagggattatttccaactaggc
tcgctctttagggctgggtataacctggacgctgattatggtgtcaataaggtcaatacc
gcttttgatggaggcatgccttatagcgataaattttccatctatttttttgtaggggct
tttgggcgcttccaaccccttaacatcttcattcaaggcaatagccctgaaactaggggt
attgctaatttggaatactttgtttatgccagtgaaataggagcggcgatgatgtggcgc
agctttagggtggcttttacgatcaccgatattagtaaaacctttcaatcccagcctaaa
caccatcaaatcggcactttagaattgaattttgctttttga
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