Helicobacter pylori Shi112: HPSH112_03790
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Entry
HPSH112_03790 CDS
T02037
Name
(GenBank) soluble lytic murein transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
hhp
Helicobacter pylori Shi112
Brite
KEGG Orthology (KO) [BR:
hhp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hhp01011
]
HPSH112_03790
Enzymes [BR:
hhp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HPSH112_03790
Peptidoglycan biosynthesis and degradation proteins [BR:
hhp01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HPSH112_03790
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
DUF5663
Motif
Other DBs
NCBI-ProteinID:
AFI00959
LinkDB
All DBs
Position
complement(757869..759551)
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AA seq
560 aa
AA seq
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MRFFILFFIGMLGVGFSQTEFNLKDLEKKPAGIVRDYYLWRYISDKKTTLENAKKAYELT
QNKNNALQKAMQEKGSDNPEKSPDVKLPEDIYCKQTALESMLEETDTFQASCIAIALKSK
IKDFDKIPLQTLKPLQIKIKEAYPVLYEELEILQSKNVSASLFKANAQVFSALFNHLSYE
KKLQIFEKHIPIKELNRLLDEDYPAFNRLIYQVILDPKLDHFKDALTKTNATHSNAQTFF
ILGINEILRKKPSKALKYFERSESVIKDDDFSKDRAVFWQYLVSKKKKTLERLSQSPALN
FYSLYASRKLQTTPSYRIISHIQNLSQEDPPFNTYDPFSWQIFKEKTLSLKDESAFNAML
KSLYYEKSAPELTYLLSQRNKDKIYYYLSPYEGIIEWQNMDEKAMAYAIARQESFLLPAV
ISRSFALGLMQIMPFNVGPFAKSLGMDNVDLNDMFNPNIALKFGNYYLNHLKKEFNHPLF
VAYAYNAGPGFLRRWLESSKRFKEKNHFEPWLSMELMPYSETRLYGFRVMRNYLIYQEIF
GNFIPVDAFLEQTLNSKDKP
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttttttattttattttttatcggcatgcttggcgttggtttttctcaaactgag
ttcaatttaaaagatttagaaaaaaagcccgctgggatcgttagggattattatttatgg
cgttatattagcgataaaaaaaccactttagaaaacgctaaaaaagcctatgaattgact
caaaataaaaataacgccctgcaaaaggccatgcaagaaaaaggctcagacaatccagaa
aaaagccctgatgttaaattgcctgaagatatttattgcaagcaaacggctttagaaagc
atgttagaagaaacagacactttccaagcaagctgtatcgctatcgctttaaaatcaaaa
atcaaagattttgataaaatcccccttcaaacccttaagcccttacaaattaaaatcaaa
gaggcttaccccgttctttatgaagaattagaaattttgcaaagtaagaatgtgagcgct
tctttatttaaggctaacgcgcaagtgtttagcgcgcttttcaaccatttgagttatgaa
aaaaagctccaaatttttgaaaagcatatccctattaaagagttaaaccgccttttagat
gaagattacccggcgtttaaccgcttgatctatcaagttattttagatcctaaattggat
cattttaaagacgctctcactaaaactaacgctacccacagcaacgcgcaaacctttttt
atcctagggattaatgaaattttgcgcaaaaaaccctctaaagcgctcaagtattttgaa
cgatcagaatcggttatcaaggacgatgatttttcaaaagacagagcggttttttggcag
tatttagtctctaaaaagaaaaaaactttggaacgcctttcacaaagccctgccttaaac
ttctatagtctttatgcgagccgtaagctccaaaccacgcccagttatcgcatcatttct
cacattcaaaatttaagccaagaagaccctccttttaacacttatgaccctttttcgtgg
caaatttttaaggaaaaaaccttgagtttgaaagatgagagcgcgtttaatgcgatgcta
aaaagcttgtattatgaaaaaagcgcccctgaattgacctatcttttaagccaacgcaat
aaggacaagatttattattatttatccccttatgaaggcattattgaatggcaaaatatg
gatgaaaaggctatggcgtatgcgatcgctaggcaagaaagtttcttgctcccggcagtc
atttcgcgctcgttcgctttggggcttatgcaaatcatgccctttaatgtagggcctttc
gctaaaagccttggcatggataatgttgatctaaacgacatgtttaaccccaatatcgct
ctcaaatttggtaattattacttgaaccatctaaaaaaagaattcaaccacccccttttt
gtcgcctacgcttataacgctgggcctgggtttttaaggaggtggctagaaagctccaaa
cgatttaaagaaaaaaatcattttgagccatggcttagcatggagcttatgccttatagc
gaaacccgtttgtatggctttagggtcatgcgcaattacttgatttatcaagaaattttt
gggaatttcatccctgttgatgcatttttagaacaaactcttaactcaaaggacaaacca
tga
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