KEGG   Helicobacter pylori Shi112: HPSH112_04330
Entry
HPSH112_04330     CDS       T02037                                 
Name
(GenBank) cag island protein
  KO
K12105  cag pathogenicity island protein 20
Organism
hhp  Helicobacter pylori Shi112
Module
hhp_M00564  Helicobacter pylori pathogenicity signature, cagA pathogenicity island
Brite
KEGG Orthology (KO) [BR:hhp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hhp02044]
    HPSH112_04330
Secretion system [BR:hhp02044]
 Type IV secretion system
  Cag pathogenicity island (PAI) protein
   HPSH112_04330
SSDB
Motif
Pfam: Mersacidin
Other DBs
NCBI-ProteinID: AFI01067
LinkDB
Position
873539..874651
AA seq 370 aa
MAGTQAIYESSSASFLSQVSSVISSTSGVAGPFAGIVAGAMTAAIIPIVVAFTNPQMTAI
MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
QIGAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSATPKYA
LALQEQLRSQASNSSMNDTADSLDSCTALGALASSSKVFFSCMQISMTPMSVSMPTVYAK
YQALAANALTSGVNPMTTPACPTGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
ERVQTKIIVK
NT seq 1113 nt   +upstreamnt  +downstreamnt
atggcaggcacacaagctatatatgaatcatcttctgcaagcttcttatcgcaagtctca
tcagtcatctcaagcacaagtggtgttgcagggccatttgcaggaatagtggcgggtgct
atgacagcagcgattattcctattgttgtggcatttactaatccgcaaatgaccgctatc
atgacccaatacaatcagagcatcgctgaagccgtaagcatgcctatgaaagccgctaac
caacaatacaaccaattgtatcaaggttttaacgatcaaagcatggctgtggggaacaat
atcttaaatattagcaaattaacaggggaatttaacgcgcaaggcaacacgcaaggcgcg
caaattggtgctgttaatagtcagattgcaagcattttagcgagtaacactacccctaaa
aatcccagtgctattgaagcttatgcgacgaatcaaatcgctgttcctagcgtgccaaca
acggttgaaatgatgagcggtatcttaggcaatattacaagtgcaacaccaaaatacgcc
ctagccctacaagagcaactgcgttctcaagcaagcaacagctcaatgaatgatacagcc
gattcccttgatagctgtaccgctttgggtgcgcttgctagctcatcaaaagtgtttttt
agttgcatgcaaatttctatgactcctatgagtgtctctatgcccactgtttatgccaaa
taccaagcgttagccgctaatgccctaacttcaggcgttaatcctatgaccactcctgca
tgccctactggggacaaagttcttgtcgtttattgctatgctgaaaaagtagcagaaatt
ttgagagaatactatatagaatttgtgaaaaacaataccaatttgttgcaaaacgcttct
caaatgatacttaatcaatcaggattagctactagcacctatgacactcaagcgatttct
aacataagctcgctatataactacaatatagtagcgaataaatcttttttgaaatcacat
ctgacttatcttgattacatcaaagacaaacttaaggggcaaaaagatagctacctaaca
gaaagggtgcaaactaaaataatcgtgaagtga

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