KEGG   Helicobacter pylori Shi112: HPSH112_04425
Entry
HPSH112_04425     CDS       T02037                                 
Name
(GenBank) cag pathogenicity island protein cag alpha
  KO
K03196  type IV secretion system protein VirB11 [EC:7.4.2.8]
Organism
hhp  Helicobacter pylori Shi112
Pathway
hhp03070  Bacterial secretion system
Module
hhp_M00564  Helicobacter pylori pathogenicity signature, cagA pathogenicity island
Brite
KEGG Orthology (KO) [BR:hhp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HPSH112_04425
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hhp02044]
    HPSH112_04425
Enzymes [BR:hhp01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     HPSH112_04425
Secretion system [BR:hhp02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   HPSH112_04425
SSDB
Motif
Pfam: T2SSE DEAD nSTAND3 AAA_7 ResIII ABC_tran AAA_19 ATP_bind_1 FtsK_SpoIIIE Mg_chelatase AAA_22 Pox_A32 DUF87 TrwB_AAD_bind Septin AAA_16 ATPase GARS_A Viral_helicase1 NACHT IPPT TsaE AAA_33
Other DBs
NCBI-ProteinID: AFI01086
LinkDB
Position
894579..895571
AA seq 330 aa
MTEDRLSAEDKKFLEVERALKEAALNPLRHATEELFGDFLKMENITEICYNGNKVVWVLK
NNGEWQPFDVRDKKAFSLSRLMHFARCCASFKKKTIDNYENPILSSNLANGERVQIVLSP
VTVNDETISISIRIPSKTTYPHSFFEEQGFYNLLDNKEQAISAIKDGIAIGKNVIVCGGT
GSGKTTYIKSIMEFIPKEERIISIEDTEEIVFKHHKNYTQLFFGGNITSADCLKSCLRMR
PDRIILGELRSSEAYDFYNVLCSGHKGTLTTLHAGSSEEAFIRLANMSSSNNAARNIKFE
SLIEGFRDLIDMIVHINHHKQCDEFYIKHR
NT seq 993 nt   +upstreamnt  +downstreamnt
atgactgaagacagattgagtgcagaagataaaaaatttctagaagtagaaagagcttta
aaagaagcggcattaaatcctttaaggcatgctactgaagaactttttggtgatttttta
aaaatggaaaatatcactgagatttgttacaatgggaacaaagttgtatgggttttaaaa
aataatggcgaatggcaaccatttgatgtgagagacaagaaagcctttagtctatctcgt
ttaatgcattttgctcggtgttgtgcaagttttaagaaaaaaacaatagacaactatgaa
aatcctattttgagcagcaatttagcgaatggtgaaagggtgcaaattgtcctttcccct
gttacagttaatgatgaaaccatttccatatccataaggatacctagcaaaacaacctat
cctcatagcttctttgaagaacagggtttttataatctactagataacaaagaacaagcg
atcagcgcgattaaagatggtattgctatcggtaagaatgtgattgtttgtggtggcaca
ggaagcggtaagacgacttatatcaaaagcatcatggagtttatccctaaagaagaaagg
atcatatccattgaagacaccgaagagattgtattcaaacaccacaagaactacacacag
cttttttttggtgggaatatcacctctgctgattgtttaaagtcatgtttgagaatgcga
cctgatagaatcattttaggagaactcagaagcagtgaggcatatgatttttataacgtg
ctttgtagcggtcataaaggcacgctaaccactctacatgcagggagcagtgaagaagcg
tttattcgtttagccaacatgagttcatctaataacgcagcaaggaatatcaagtttgaa
agcctcattgagggctttagagatttaattgatatgattgtccatatcaaccaccacaaa
cagtgtgatgaattttatatcaaacataggtag

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