Helicobacter pylori Shi112: HPSH112_05220
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Entry
HPSH112_05220 CDS
T02037
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
hhp
Helicobacter pylori Shi112
Pathway
hhp03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hhp00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HPSH112_05220 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hhp03011
]
HPSH112_05220 (rpsA)
Ribosome [BR:
hhp03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HPSH112_05220 (rpsA)
Bacteria
HPSH112_05220 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
CsrA
S1CSD-TOTE-1
RuBisCo_chap_C
CBFD_NFYB_HMF
RuvA_N
GspL_C
Motif
Other DBs
NCBI-ProteinID:
AFI01240
LinkDB
All DBs
Position
1077760..1079418
Genome browser
AA seq
552 aa
AA seq
DB search
MSKIPDDQNFNDEEENFAELLKKEETLEKGTIKEGLIVSINENDGYAMVSVGGKTEGRLA
LSEITDEKGQLLYQKNDPIIVHVSEKGEHPSVSYKKAISQQKIQAKIEELGENYENAIIE
GKIVGKNKGGYIVESQGVEYFLSRSRSSLKNDANHIGKRIKACIVHVDKENHSINISRKR
FFEVNDKRQLEVSKGLLEATEPVLGVVCQITPFGIFVEVKGVEGLVHYSEISHKGPVNPE
KYYKEGDEVYVKAIAYDEEKRRLSLSIKATIEDPWEEIQDKLKPGYAIKVVVSNIENYGA
FVDIGNDIEGFLHVSEISWDKNVSHPSNYLSVGQEIDVKIIDIDPKNRRLRVSLKQLTNR
PFDVFESKHQVGDVLEGKVATLTDFGAFLNLGGVDGLLHNHDAFWDKDKKCKDHYKIGDV
IKVKILKINKKDRKISLSAKHLVTSPTEEFAQKHKTDSVVQGKVVSIKDFGVFINADGID
VLIKNEDLNPLKKDEIKIGQEITCVVVAIEKSNNKVRASVHRLERKKEKEELQAFNTSDD
KMTLGDILKEKL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagataccagatgatcagaactttaatgacgaggaggaaaacttcgcagaactc
ttaaaaaaagaagaaaccctagaaaaaggcactatcaaagaagggctaatcgtttccatc
aatgagaatgatggctatgccatggtgagcgtgggcggtaagacagaaggccgtttggct
ttgagtgagatcaccgatgaaaaggggcagttgctgtatcaaaaaaatgaccccattatc
gtgcatgtgtccgaaaaaggtgaacaccctagcgtttcctacaaaaaggccatttcccaa
caaaagattcaagccaaaattgaagaattaggcgaaaactatgaaaacgccattattgaa
ggcaagattgtaggcaagaataaagggggttatatcgtggagtctcaaggcgtggagtat
tttctctctcgctcgcgctcttctttaaagaatgacgcaaaccatatcggcaaacgcatt
aaagcgtgcatcgttcatgtggataaggaaaaccattctatcaatatttctcgcaaacga
ttctttgaagtcaatgacaaacgacagcttgaagtttctaaaggattgttagaagctaca
gagccggtgttaggggttgtgtgccagatcaccccttttggtatttttgtagaagttaag
ggggttgaaggattagtccattattctgaaatcagccataaaggaccggtcaaccctgaa
aaatactacaaagagggcgatgaagtctatgtcaaagccatcgcttatgatgaagaaaaa
agacgcctttcactctccataaaagcgaccatagaagacccatgggaagagatccaagac
aagctaaaacccggatacgccattaaggtggtggtgagcaatattgaaaattatggggcg
tttgtggatattggtaatgatattgaaggctttttgcatgtttctgaaatctcttgggat
aaaaatgtcagccaccctagcaactacttgagcgtggggcaagagattgatgtgaagatc
attgacattgatccaaaaaatcgccgtttaagggtttctttaaagcaactcactaacagg
ccttttgatgtttttgaatccaaacaccaagtgggggatgttttagaaggcaaagtggcg
actttaacggattttggggcgtttttgaatctgggtggggtggatggtttgctccacaat
cacgacgctttttgggataaagataaaaagtgcaaagaccactataaaattggcgatgtg
atcaaagtgaaaatccttaaaatcaacaaaaaagatagaaagatctctttgagcgcgaag
catttggttacttcccctacagaagaattcgctcaaaagcataaaacagacagcgtggtt
caaggcaaagtggtgagtattaaggattttggcgttttcattaacgctgatggcattgat
gtgctcatcaaaaatgaagacttgaaccccttgaaaaaagatgaaatcaaaatagggcaa
gaaatcacatgcgtggtggttgcgattgaaaaatctaataacaaggtgcgcgcttctgtg
cataggttagagcgcaaaaaagaaaaagaagagttgcaagcttttaacacgagcgatgat
aaaatgactttaggggatattcttaaagaaaagctctaa
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