Helicobacter pylori Shi112: HPSH112_05805
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Entry
HPSH112_05805 CDS
T02037
Name
(GenBank) outer membrane protein HofH
Organism
hhp
Helicobacter pylori Shi112
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HP_OMP_2
Motif
Other DBs
NCBI-ProteinID:
AFI01350
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Position
1194692..1196107
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AA seq
471 aa
AA seq
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MKKASQVLFFGAFLSSSLQGFEAKLNGFVDQSSTIGFNQHKINKERGIYPMQQFATIAGY
LGLGFSLLPKKVSDHVLKGKIGGMVGSIFYDGTKKFEDGSVSYNLFGYYDGFMGGYTNIL
QTDSLEAQNMKYNKNVRNYVFSDAYLEYRYKDYFEFKGGRYLSGMPFRSGQTQGFQVSGQ
YKHARLTWFSSFGRAFAYGSFLMDWFAARTTYSGGFTKNDKGGYDSHGQKVLYGTHAVQL
TYKPHRFLVEAFYYLSPQIFNAPGIKIGWDSNPNFSGTGFRSDTSITGFFPIYYPWMIVK
SNGSPVYRYDTPATQNGQNLMIRQRFDINNYNVSIAFYKVFQNANGWIGNMGNPSGVIMS
GNSVYAGFSGTALKRDAATILLSCGGTHFAKKFTWKFATQYSNSVVSWEARAMISLAYKF
SEYLSGSVDLSYYGVHTNKGFKPGENGPVPKNFPALYSDRSALYTALIASF
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggcaagtcaggttttattctttggggcatttttaagctcttcgttacaaggt
tttgaagccaagctcaacggctttgtggatcaatccagcactatcggctttaaccagcat
aaaatcaataaagaaagaggcatctaccctatgcagcaattcgcaacgattgcgggctat
ttagggcttggttttagcttgttacccaaaaaggtttcagaccatgttctaaaaggcaaa
atagggggcatggtgggatctattttctatgacggcacgaagaagtttgaagacggatct
gtatcttacaacctctttggttattatgatgggttcatggggggttatacaaacatctta
caaaccgatagccttgaagcacagaacatgaagtacaataaaaatgtccgcaattatgtc
tttagcgatgcgtatttggaataccgctataaagattattttgaattcaagggcgggcgc
tacctttctggcatgccttttagaagcgggcaaactcaaggctttcaagtttctgggcaa
tacaagcatgcacgcttgacttggtttagctcttttgggagggcgttcgcttatggttcg
tttttgatggattggtttgccgctaggaccacttatagcgggggctttaccaaaaacgat
aagggaggttatgatagccatgggcaaaaggtgctttatggcacgcatgcggtgcaactc
acctataaacctcatcgtttcctcgtggaggccttctattacctctcgcctcaaatcttt
aacgctccgggcattaagattggttgggactctaaccctaattttagcggcacaggcttt
cgctcagatacgagcatcacagggtttttccccatttactacccttggatgatcgttaaa
tctaatgggagtccggtctatagatacgacacgccagccactcaaaacgggcagaatctc
atgatccgccaacgctttgatataaacaattacaatgtttccatcgctttttataaagtc
tttcaaaacgctaatggttggataggcaatatgggtaatccaagcggtgtgataatgtca
ggtaacagcgtgtatgctggtttttcaggcacagcccttaaaagagacgccgctaccatt
ctcctttcttgtggcggcactcattttgccaaaaaattcacatggaaattcgccacgcaa
tactccaattcagtggtctcttgggaagcaagagcgatgatctctttagcctataaattc
tctgaatatttgagcggcagcgtcgatctttcatattatggcgtgcacactaacaaaggc
ttcaaaccgggtgaaaacgggcctgtgcctaaaaacttccctgccctttattctgacagg
agcgcgttatacacggccctaatagcgtcattttga
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