Helicobacter pylori Shi112: HPSH112_07850
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Entry
HPSH112_07850 CDS
T02037
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hhp
Helicobacter pylori Shi112
Pathway
hhp03030
DNA replication
hhp03430
Mismatch repair
hhp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPSH112_07850
03430 Mismatch repair
HPSH112_07850
03440 Homologous recombination
HPSH112_07850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhp03032
]
HPSH112_07850
03400 DNA repair and recombination proteins [BR:
hhp03400
]
HPSH112_07850
Enzymes [BR:
hhp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPSH112_07850
DNA replication proteins [BR:
hhp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPSH112_07850
DNA repair and recombination proteins [BR:
hhp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPSH112_07850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AFI01747
LinkDB
All DBs
Position
complement(1605547..1606410)
Genome browser
AA seq
287 aa
AA seq
DB search
MSDSLLHKDIQALIARLKHQDLSLGMLEKSLSRLIYDEVNLEYLKACGLNFVETSENLIT
LKNLKTPLKDEVFSFIDLETTGSCPLKHEILEIGAVQVKGGEIINRFETLVKVKSVPDYI
AELTGITYEDTLNAPSVHEALQELRLFLGNSVFVAHNANFDYNFLGRYFVEKLHCPLLNL
KLCTLDLSKRAILSMRYSLSFLKELLGFGIEVSHRAYADALASYKLFEICLLNLPSYIKT
TMDLIDFSKCANTLIKRPPRARHQETLAPFPLFERTKGLLNIIKATS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagcctcttgcataaagacattcaagccctaatcgctcgcttaaagcaccag
gatttaagcttgggcatgctagaaaaatcgctctctcgccttatttatgatgaagtcaat
ttggaatatttaaaagcgtgcgggcttaatttcgtagaaacgagtgaaaatttaatcacg
ctcaaaaaccttaaaaccccccttaaagatgaggttttttcctttattgatttagaaacc
accggctcttgccccctaaaacatgagattttagaaatcggagctgtgcaagtgaagggg
ggggaaatcatcaatcgttttgaaacccttgtgaaagtcaaaagcgttcctgattatatc
gctgagcttacaggcatcacttatgaagacaccctaaacgccccaagcgtgcatgaagcc
ttgcaagaattgcggctttttttaggcaatagcgtgtttgtagcccataacgctaatttt
gattacaattttttagggcgttattttgtagaaaaattgcattgccccttattgaattta
aagctttgcactttggatttatccaaacgagccattttgtccatgcgttattctttgagc
tttttaaaagagcttttagggtttggtatagaagtcagccacagagcctacgcggacgct
ttagcgagctataagctctttgaaatatgcttattaaacttgcccagttacatcaaaaca
acaatggatttgattgatttttccaaatgcgctaacaccttgatcaaaaggcccccaaga
gccagacaccaggagactctagcgccatttcctctttttgagaggacaaagggtttgtta
aatatcataaaagcaaccagttaa
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