Helicobacter pylori Shi112: HPSH112_07925
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Entry
HPSH112_07925 CDS
T02037
Name
(GenBank) putative recombination protein RecB
Organism
hhp
Helicobacter pylori Shi112
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Cas_Cas4
DEAD
XRCC4_CC
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AFI01760
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All DBs
Position
1614443..1617259
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AA seq
938 aa
AA seq
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MDTQRQCMALKASAGSGKTFALSVRFLALLFKGANPSEILTLTFTKKATAEMKERILDYL
KILQKENLEDEKEKEKSQNILKELEEKYHLNPSFVQNSAQEIYQRFLNAEMRISTIDAFF
QSILRKFCWFVGLSANFEVNEDTKAHQQQLNASFLSALNNKQLEELSVFITQCLSHDNYT
SDSILERLRFLKNKLYLFDPNKKEPAFDEKGFLEKLRSLNQQIQSVETASDMAKTAIKCD
DFRGFLNSSLTWLEKKSEYRHFKKLKDEIPTLESECEEIENDLKRYYEAKESALFKKFPK
FIQLYDKATSKIQALDFDAIKDKVHALLNGYEEMPAEFFYFRLDSRIAHILIDEFQDTSL
NDYKILAPFIDEIKAGIGQAKWHRSVFFVGDVKQSIYGFRGSFSSLFESVSKDFYHDNLQ
FNHRSSPLIINYVNTIFKKAYQNSPTAYLEQKYPKASSNKHARDGYVKVSLVADERELLL
KQILQEAKNLLEHRIDPKDITLLCATNDDALEIKNYLQENLSAIRPSTESSAKLSQFVES
KIIKNALEYALAEEPYKPFYKHSVLKLAGYLHDDAIALAGFNPKKESVAGFVWKVMELFE
LYGECAQICLELAVGCEDANEFLEKLEAKEIASFNAKGAQIMTIHKSKGMQFPYVIVCER
LGKPKSNSSNQFLEEYDGTELLRLYYRMKNREMVDKDYARALDKEEAAKDHEETNVYYVA
FTRAELGLIVVAKDKKGMREKLDLLPLEEGEIAPVISSQKEPLIASVVIKPHAYGEQVQE
IEEEPSDYEKNNDQEAINFGIALHKGLEYQYAYNIPKKSVLEYLNYHHGFYGLDYQALEE
SLELFENDAKIQALFKNLALRGEVAFLFEGVVSRIDVLLWDKGQNLYVLDYKSSQNYQQS
HKAQVSHYAAFLQTQAPHFKIQAGIIYAHKRLLEKLWV
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggatacacaaagacaatgcatggctttaaaggcttcagcaggaagcgggaagactttc
gctttgagcgtgcggtttttggccctgttgtttaagggggctaatcctagcgagatttta
acgctcactttcactaaaaaggccaccgccgaaatgaaagagcgcattttagactattta
aaaatcttgcaaaaagaaaaccttgaagatgaaaaagaaaaagaaaaatcccaaaatatc
ctaaaagaattagaagaaaaataccacttaaaccctagtttcgtgcaaaatagcgctcaa
gaaatctaccaacgctttttaaacgccgaaatgagaatcagcaccattgatgcgtttttc
caaagcattttaaggaaattttgttggtttgtggggttgagcgcgaattttgaagtcaat
gaagacacaaaagcgcaccagcaacagctcaatgcgagttttttgagcgctttaaataat
aaacagcttgaggaattgagcgtttttatcactcaatgcttaagccatgataattacaca
agcgattctattttagagcggttgcgttttttaaaaaacaagctctatttatttgatccc
aataagaaagagcctgcatttgatgaaaagggttttttagaaaaattaagaagcttgaac
caacaaattcaaagcgtagaaacagcgtcagatatggctaaaacagccattaaatgcgat
gattttagggggtttttaaacagctctttaacctggcttgaaaaaaagagcgaataccgc
catttcaaaaaactcaaagatgaaatccccactttagagagcgaatgcgaagagattgaa
aacgatctaaaacgctattatgaagccaaagaaagcgcattgtttaaaaaattccctaaa
ttcatccagctttatgataaagccacttctaaaatccaagccctggattttgatgcgatt
aaagataaagtccatgccttattgaatggctatgaagaaatgccggcggagtttttttat
ttcagattggacagcaggatcgcgcacattttgattgatgaatttcaagacacgagcttg
aacgattataagattttagccccttttattgatgagattaaagccgggatagggcaagct
aaatggcacaggagcgtgttttttgtgggcgatgtcaagcagagcatttatggctttagg
gggagttttagctccttgtttgaaagcgtttctaaggatttttaccacgataatttacaa
ttcaaccaccgcagttcgcctttgatcattaattatgtgaataccatttttaaaaaggct
tatcaaaattcccccaccgcttatttggagcaaaaataccctaaagcttccagcaacaaa
catgctagagacggctatgttaaagtctctttagtggctgatgaaagagaattgttatta
aaacaaatcttgcaagaagctaaaaaccttttagagcaccgcattgatcctaaagacatt
acccttttatgcgccactaatgacgacgctttagaaatcaaaaattatttgcaagagaat
ttgagtgcgattcgcccaagcacggaatctagcgctaaattgtctcaatttgtggaatct
aaaatcattaagaacgctttagaatacgctctagctgaagaaccttacaagcccttttat
aagcacagcgttttaaaactcgctggatacttgcatgatgatgccatcgctttagctggt
ttcaaccctaaaaaagagagtgtggcaggctttgtgtggaaggtgatggaattgtttgag
ctttatggagagtgcgcgcaaatctgcttggagttggcggttgggtgcgaagacgcgaat
gaatttttagaaaaattagaggctaaagagatcgcttctttcaatgcaaaaggcgctcaa
atcatgaccatccataaatctaaaggcatgcaattcccttatgtgatcgtgtgcgaacgc
ttgggcaagcctaaatcaaatagctccaatcaattccttgaagaatatgatggcacagag
cttcttcgcctttattacagaatgaaaaatcgtgagatggtggataaagattacgctagg
gctttagataaagaagaagcggctaaagatcatgaagaaaccaatgtgtattatgtcgca
ttcactagggctgagttagggctgattgtcgtggctaaagacaaaaaaggaatgcgcgaa
aaattggatcttttgcctttagaagagggagaaatcgcgccggttatttcttctcaaaaa
gagcctttaattgcaagcgttgtaatcaagccccatgcctatggcgagcaagtccaagag
atagaagaagagcctagcgattatgaaaagaataacgaccaggaagcgatcaattttggt
atcgccttgcacaagggattggaataccaatacgcttataatattcctaaaaaaagcgtt
ttagaatacttaaactaccatcatggtttttatggtttggattaccaagcgttagaagaa
agtttagagctttttgaaaacgatgcaaagatacaagctctttttaaaaatttggcccta
aggggcgaagtggcttttttatttgaaggggttgtgtctaggattgatgttttattgtgg
gataaggggcaaaatttgtatgttttagattataaaagctctcaaaattaccagcaaagc
cataaggcgcaagtttctcattacgctgcgtttttgcaaactcaagccccccattttaag
atacaagcaggcattatttacgctcataaaagactgcttgaaaaattatgggtttga
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