Helicobacter pylori Shi112: HPSH112_08090
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Entry
HPSH112_08090 CDS
T02037
Name
(GenBank) rare lipoprotein A
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
hhp
Helicobacter pylori Shi112
Brite
KEGG Orthology (KO) [BR:
hhp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hhp01011
]
HPSH112_08090
Enzymes [BR:
hhp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HPSH112_08090
Peptidoglycan biosynthesis and degradation proteins [BR:
hhp01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HPSH112_08090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Peptidase_C25
Motif
Other DBs
NCBI-ProteinID:
AFI01791
LinkDB
All DBs
Position
complement(1649138..1650085)
Genome browser
AA seq
315 aa
AA seq
DB search
MGLALERVYFLGVIFLISACAVKREGVKNLSYKHESLRAYENAKDYDPTTKKATYKRNFF
ERHFKHHSNSQDNNTKDQPLDNGMRDSSAIQRATMRPYQVGNKWYYPTKVDLGEKFDGIA
SWYGPNFHAKKTSNGEIYNMYAHTAAHKTLPMNTVVKVINVENHLSTIVRINDRGPFVSD
RIIDLSNAAARDIDMVRKGTASVRLIVLGFGGVISKQYEQSFNANYSKILHKEFKVGESE
KSVSGGKFSLQMGAFRNQIGAQTLADKLQAENPNYSVKVAFKDDLYKVLVQGFQSEEEAR
DFMKKYNQNAVLTRE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgggtttggcgttggaaagagtttattttttaggcgttatttttttgattagcgcttgt
gcggttaaaagagagggggtaaagaatttgtcttacaagcatgaaagcttgcgcgcttat
gaaaacgctaaagactacgatccgacaaccaaaaaagccacctataaacgcaactttttt
gaacgccatttcaaacaccactccaattcgcaagataacaacacaaaagatcagccgcta
gataacggcatgcgcgattctagcgcgatccaaagagccaccatgcgcccttatcaagtg
gggaacaagtggtattaccccactaaagtggatttgggcgaaaaatttgatggcattgcg
agctggtatggccccaatttccatgccaaaaaaaccagtaatggggaaatttataacatg
tatgcccacaccgccgcgcacaagactttacccatgaacaccgtggtgaaagtcatcaat
gttgaaaaccatttaagcaccattgtgcgcatcaacgatagagggccttttgtgagcgat
cgcatcattgatttgtctaatgcggccgctagggatattgatatggttagaaaaggcaca
gctagcgtgcgtcttattgttttgggttttggtggggttatctctaagcaatacgaacaa
tcctttaacgctaactattcaaagatcttacacaaggaatttaaagtcggcgagagcgaa
aaaagcgtgagcggagggaaattttctttgcaaatgggggcttttagaaaccaaataggc
gctcaaactttagcggataaattgcaagcagaaaatccaaattacagcgttaaggtcgct
tttaaagacgatttgtataaagttttagttcaagggtttcaaagcgaagaagaggctagg
gattttatgaaaaaatataaccagaatgcggttttaaccagagaatga
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