Helicobacter pylori Shi112: HPSH112_08095
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Entry
HPSH112_08095 CDS
T02037
Name
(GenBank) putative regulatory protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
hhp
Helicobacter pylori Shi112
Brite
KEGG Orthology (KO) [BR:
hhp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hhp01011
]
HPSH112_08095
Enzymes [BR:
hhp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HPSH112_08095
Peptidoglycan biosynthesis and degradation proteins [BR:
hhp01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HPSH112_08095
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
HTH_Mga
DUF928
SLT_2
Motif
Other DBs
NCBI-ProteinID:
AFI01792
LinkDB
All DBs
Position
complement(1650085..1651197)
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AA seq
370 aa
AA seq
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MKCFSQKWLVFFVTHWLLLASLGHAKMAFESNIDTKALEAFGVNAGFLSQMPNALKKMNK
EEEWKKLVKRFDVNYQFIPIIKNMLIEASVPQEFLFLAMAESKFSSRAYSRKKAVGIWQF
MPSTAKELGLKVNHYIDERRDPIKSTKAAITYLKRLYKQTGEWYLVAMAYNYGLRKVQNA
IKVAGTSDIKILLDEDKKYLPKETREYIRSILSLALKFNSLDNLKDKEYLLNRGARVSLV
GVPFKRHTSLVQVAKNLNLSLETLKSYNHQFRYNILPSKDPTYTIYIPYEKLALFKQRQL
KQNKNIQASPKSPFITHVVLPKETLSSIAKRYQVSISSIQLANNLKDSNIFIHQRLIIPT
NKKLLATREF
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgttttagtcaaaaatggttggttttttttgttacccattggcttttattggct
tctttaggccatgcgaaaatggcttttgaatccaatattgacaccaaagcgttagaggct
tttggggttaatgcgggctttttatcccaaatgccaaacgctttaaaaaaaatgaacaaa
gaagaagaatggaaaaagttagtcaaaagatttgatgtgaattaccagttcatccccatc
attaaaaacatgctaatagaagcgagcgtgccacaagaatttttatttttagccatggca
gagtctaaattttcatcaagggcttatagcaggaaaaaagcggtagggatttggcaattc
atgccaagcacggctaaagaattagggcttaaagtcaatcattacattgatgaaagaaga
gatcccattaaaagcactaaagcggcgatcacttatttgaaacggctctacaagcaaacc
ggggagtggtatttggtcgctatggcgtataattacggcttacgcaaggttcaaaacgct
attaaagtcgccggcacttcggacattaagattttgttagatgaagataaaaagtatctc
cctaaagagacacgagagtatatccgctccattctaagcctagcgttaaaattcaacagc
ctagacaacctcaaagataaagaatatctgctcaatcgtggggcgagggtgagtttagtg
ggcgttccgtttaaaaggcacacttctttagtccaagtggccaaaaatttaaacttgagt
ttagaaaccttaaaatcctacaaccaccaattccgttataacattctgccttctaaagac
cccacctacaccatttatatcccttatgaaaaactcgcccttttcaaacaacgccaactc
aaacaaaataaaaacattcaagccagtccaaaaagcccttttatcacccatgtggtcttg
cctaaagaaaccttatcttctatcgctaaacgctatcaagtcagcatttctagtatccaa
ttagccaataacctcaaagattctaatatttttatccaccagcgcttgatcatccctacc
aataagaaattactcgctacaagggaattttaa
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