Helicobacter pylori Shi169: HPSH169_00890
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Entry
HPSH169_00890 CDS
T02038
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
hhq
Helicobacter pylori Shi169
Pathway
hhq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hhq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HPSH169_00890 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hhq01007
]
HPSH169_00890 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhq03016
]
HPSH169_00890 (lysS)
Enzymes [BR:
hhq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HPSH169_00890 (lysS)
Amino acid related enzymes [BR:
hhq01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HPSH169_00890 (lysS)
Transfer RNA biogenesis [BR:
hhq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HPSH169_00890 (lysS)
Prokaryotic type
Other AARSs
HPSH169_00890 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AFH98888
UniProt:
A0A0E0WAU5
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All DBs
Position
173960..175465
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AA seq
501 aa
AA seq
DB search
MFSNQYIQQRIHKANSLREEGKNPYKNGLKRSLTNAAFLEKYAYVKGLEEPKDKEKCESI
VGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEFKSLKKHLEVGDIVLVKGFPFAT
KTGELSVHALEFHILSKTIVPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIV
SSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYHNALEIERYLRIAPELYLKRLIVGG
FEAVFEINRNFRNEGMDHSHNPEFTMIEFYWAYHTYEDLIELSKKLFDYLLKTLNLPSKI
IYDDMEVDFNQTSVISYLDALETIGGISKDILEKEDRLLAYLLEQGIKVEPNLTYGKLLA
EAFDHFVEHQLINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDP
LDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIK
DVILFPAMRPVKNDFNVESEE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgttttctaaccaatacatccaacaacgcatccataaagccaacagcttgagagaagaa
gggaaaaacccttataaaaatggcttgaaacgaagccttacaaacgccgcttttttagaa
aaatacgcttatgttaagggtttagaagagcctaaagacaaggaaaaatgcgagagtatt
gtagggagggtcaagcttttgcgtttaatgggtaaggcttgttttattaaaattgaagat
gaaagcgcgattttgcaagcttatgtttcgcaaaatgaattgaatgatgagtttaaaagc
ctgaaaaagcatttagaagtgggcgatattgtgttggtgaaaggtttcccttttgctacc
aaaaccggtgaattgagcgttcatgccctagaatttcatattttaagcaaaaccattgtg
cctttacccgaaaaattccatggactgagcgatatagaattgcgttaccgccagcgctat
ttggatttgatagtcaatcctagcgttaaagatgtgtttaaaaaacgcagtttgattgtt
tctagcgtgcggaaattttttgaaatggaagggtttttagaagtggaaacccccatgatg
caccccattcctggcggggcgaacgcaaggccttttatcacttaccataacgctttagaa
attgaaaggtatttaagaatcgctccagaattatacctcaaacgcttgattgtggggggt
tttgaagcggtgtttgaaatcaatcgcaatttcaggaatgagggcatggatcacagccat
aaccccgaatttacgatgattgagttttattgggcgtatcacacttatgaagatttgatt
gaactcagtaagaaattatttgactacttgttaaagactttgaacttaccttcaaaaatc
atttatgacgatatggaagtggatttcaaccaaacgagcgtgatttcctatttggacgct
ttagaaacaatagggggcattagtaaggatattttagaaaaagaagacaggcttttggct
tatttgttagagcaaggcatcaaagtagagccaaatctcacttatggtaaattgctcgct
gaagcgtttgatcattttgtagagcaccagctcattaaccccacttttgtaacccaatac
cccattgagattagccccctagccagacgcaacgatagtaaccctaatattgctgacagg
tttgaattgtttattgccgggaaagaaatcgctaacggttttagcgagttgaacgatcct
ttagatcaattagaacgctttaaaaatcaagtggctgaaaaagaaaaaggcgatgaagaa
gcccaatacatggatgaagattatgtgtgggcgttagcccatggaatgccccccactgca
gggcaaggcataggcattgatagattagtgatgttactcactggagctaaaagcattaaa
gatgtgattttattcccagcgatgcgtcctgttaaaaacgattttaatgtggagagtgaa
gaataa
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