Helicobacter pylori Shi169: HPSH169_01070
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Entry
HPSH169_01070 CDS
T02038
Name
(GenBank) topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hhq
Helicobacter pylori Shi169
Brite
KEGG Orthology (KO) [BR:
hhq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhq03032
]
HPSH169_01070
03400 DNA repair and recombination proteins [BR:
hhq03400
]
HPSH169_01070
Enzymes [BR:
hhq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HPSH169_01070
DNA replication proteins [BR:
hhq03032
]
Prokaryotic type
DNA Topoisomerases
HPSH169_01070
DNA repair and recombination proteins [BR:
hhq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPSH169_01070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Terpene_syn_C_2
SpecificRecomb
ACDC
Motif
Other DBs
NCBI-ProteinID:
AFH98918
UniProt:
A0A0E0WAX6
LinkDB
All DBs
Position
206936..208870
Genome browser
AA seq
644 aa
AA seq
DB search
MYKNCVFIIESPNKIAKIKELTGSSFVFATGGHFVELVNIEVSKEFNPIFEIKKSTDKKK
DKSTHINYMINQCKDKVVYIATDPDREGYGIGYKFYEKIKNIAKTIYRTEFHEITKSGVE
KGLNNAVLFSQSNLNLYYSWLGRIVSDQFVGFTLTPYLRKNIKNFEVSAGRVQTTALSIL
VELDRKIQAFEQKNIDEKLSYSIEAIIDVLGSQISITLVEENKRKVFETKELAQNFLNDL
KNNLNPLAFLDAVEQKDKEKSPPKPFTTSNLLKDGVRILEMGVKQIQEHAQKLFEAGLIT
YIRTDSEALSKEYLQEHQAFFENIYPSVYEYREYRAGKNSQAEAHEAIRITHPHCYEDLK
KVCEKHNITDINDLKVYTLIFFNTICSQSKNAIYENTTLNFKVKTHSFKCSFSKLKSKGF
KAIKDLEEEKKDEEEIESDLDFSSLQLKTQMPILDFNIKELKAKAPSPYTESTFIAMMEI
YGIGRPSTYTSVFEILKNKNYITLEGKNRKITPTALGKSIVDFFLNDNQTQWIAISKVDN
SFTKKLEEMLDMIIKDGKSAYLDLMQNIQKKLGTEISNLYRNNSNNNISATKKEMIPPTE
KQLNFVETIEKTLQIKASDMTKKDKFACMKFIEEHSKKMPKKDN
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaaactgcgtatttatcatagaaagtcccaataagatcgctaaaatcaaagaa
ttaacaggaagttcatttgtttttgcgactggtgggcattttgttgagctagtcaatatt
gaagtgagtaaagaatttaatcctatttttgaaatcaaaaaaagcacggataagaaaaag
gataaatccactcatatcaactatatgataaatcaatgtaaagataaagtggtctatatt
gctactgaccctgatagagagggttatggtataggttataaattttatgaaaaaatcaaa
aatatagctaaaacaatttatcgcactgaatttcatgaaatcacaaaaagcggtgtagaa
aaaggcttgaacaatgctgtgctattttctcaaagcaatctcaatctatattatagttgg
ctaggtaggattgtaagcgatcaatttgtaggctttactttaacgccttatttgcgcaaa
aacattaaaaattttgaagtgagtgctggtagggttcaaactactgctctttccatttta
gtagaattagacagaaaaatccaagcctttgaacaaaagaatattgatgagaaattaagt
tatagcatagaagctattattgatgtgttaggttctcaaatctctattactttagtagaa
gagaataaaaggaaagtgtttgagaccaaagaattagcccaaaactttttaaatgactta
aaaaacaatcttaaccccttagcttttttagacgcagtagagcaaaaagataaagaaaaa
tctccacctaaacctttcaccacttctaatcttttaaaagatggggttagaattttagaa
atgggcgttaagcaaatccaagaacacgcccaaaaactttttgaagctggattgattact
tatattcgcaccgatagtgaagcgttaagtaaagaatacttgcaagagcatcaagcgttt
tttgaaaatatttatcctagcgtgtatgagtacagagaatatagggctggtaaaaattca
caagctgaagcgcatgaggctataagaattacacaccctcactgctatgaagatcttaaa
aaagtgtgcgagaaacacaatattacagatattaatgatttaaaagtctatacgcttatc
ttttttaacaccatttgctctcaaagtaaaaacgctatttacgaaaacacaactttaaat
tttaaagtaaaaacgcacagctttaaatgcagttttagcaaactcaaatctaaaggcttt
aaagcgattaaagacttagaagaagaaaagaaagatgaagaagagattgaaagcgatctt
gatttttctagcttgcaattaaaaactcaaatgcctattttagattttaatatcaaagaa
ctaaaagctaaagctcctagcccttatactgaaagcacttttatcgcaatgatggaaatc
tatggcataggaagacctagcacttatacaagtgtatttgagatcttaaaaaacaaaaat
tacattacattagagggcaaaaataggaagatcacgcccacagctcttggtaaaagcatt
gttgatttctttttgaatgataaccaaacacaatggattgctatttctaaagtggataat
agttttacaaaaaaattagaagaaatgttagatatgattataaaagatggtaaaagtgct
tatcttgatttaatgcaaaatatccaaaagaaattaggcacagaaatttctaacttatat
agaaataatagcaataacaacatttctgctacaaaaaaagaaatgatacctccaactgaa
aaacaacttaattttgtagaaactatagaaaaaactcttcaaataaaagcttctgatatg
acgaaaaaagacaagtttgcgtgcatgaagtttatagaagaacatagtaaaaaaatgccc
aaaaaggataattga
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