Helicobacter pylori Shi169: HPSH169_04700
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Entry
HPSH169_04700 CDS
T02038
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hhq
Helicobacter pylori Shi169
Brite
KEGG Orthology (KO) [BR:
hhq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhq03016
]
HPSH169_04700 (truD)
Enzymes [BR:
hhq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HPSH169_04700 (truD)
Transfer RNA biogenesis [BR:
hhq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPSH169_04700 (truD)
Prokaryotic type
HPSH169_04700 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
GutM
Motif
Other DBs
NCBI-ProteinID:
AFH99623
UniProt:
A0A0E0WCX9
LinkDB
All DBs
Position
972758..973903
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AA seq
381 aa
AA seq
DB search
MNLNFMPLLHAYNHASIDFHFNSSARDFCVHEVPLYEFSNTGEHAVIQVRKSGLSTLEML
QIFSQILGVKIAELGYAGLKDKNALTTQFISLPKKYATLLEKNTSNFQERNLKILSLNYH
HNKIKLGHLKGNRFFMRFKKMTPLNAQKTEQVLEQIAQFGMPNYFGAQRFGKFNDNHQEG
LKILQNQTKFAHQKLNAFLISSYQSYLFNALLSKRLEISKIISAFSVKENLEFFKQKNLN
INPNTLKALKNQAHPFKILEGDVMCHYPYGKFFDALELEKESERFLKKEAVPTGLLDGKK
ALYAKNLSLEIEKEFQHNLLNSHAKTLGSRRFFWVFVENITSQYIKEKAQFELGFYLPKG
SYASALLKEIKHEKGENNDEF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaattttatgcccctattgcatgcttataaccatgcgagcattgattttcat
ttcaattctagcgctagggatttttgcgtgcatgaagtgcctttgtatgaattcagtaac
acaggcgaacatgccgttattcaagtgagaaaaagcggtttaagcactttagaaatgctt
caaattttttctcaaattttaggggtaaaaatcgctgaattgggttatgcgggcttgaaa
gataaaaacgcgctgacgactcaattcatctcactccctaaaaaatacgccactttatta
gaaaaaaatacgagcaactttcaagaaagaaaccttaaaatcctgtctttgaattaccac
cataataaaatcaaattagggcatttgaaagggaatcgcttttttatgcgttttaaaaaa
atgacccccctaaacgctcaaaagactgaacaggttttagaacaaatcgcgcagtttggc
atgcctaattattttggagcgcaacgctttgggaagttcaatgacaaccaccaagagggt
ttaaaaatcttgcaaaatcaaacgaaattcgcccatcaaaaattaaacgcttttttaatt
tcaagctatcaaagttatttgtttaacgcgcttttaagcaaacgactagaaatcagtaaa
atcattagcgcttttagtgtcaaagaaaatttagaattttttaaacaaaaaaatttaaat
atcaatccaaacaccttaaaagcccttaaaaaccaagcccacccctttaaaatcttagaa
ggcgatgtgatgtgccattacccttatgggaaattttttgacgctttagaattagaaaaa
gagagcgaaaggtttttgaaaaaagaagctgtgcctacggggttattagacggcaaaaaa
gctctttatgcaaaaaatttgagtttagaaattgaaaaagaattccagcataacctttta
aatagccatgctaaaacgctaggctctaggcggtttttttgggtgtttgtagaaaatata
acttctcaatatataaaagaaaaagcgcaatttgaactgggattttacttgcctaaaggg
agttatgcgagcgcgttgctcaaagaaatcaagcatgagaaaggagaaaataatgacgaa
ttttga
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