Helicobacter pylori Shi169: HPSH169_04745
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Entry
HPSH169_04745 CDS
T02038
Name
(GenBank) cag pathogenicity island protein CagA
KO
K15842
cytotoxicity-associated immunodominant antigen
Organism
hhq
Helicobacter pylori Shi169
Module
hhq_M00564
Helicobacter pylori pathogenicity signature, cagA pathogenicity island
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CagA_N
CagA
DUF999
Motif
Other DBs
NCBI-ProteinID:
AFH99632
UniProt:
A0A0E0WBE6
LinkDB
All DBs
Position
complement(979647..982919)
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AA seq
1090 aa
AA seq
DB search
MANETIDQTKNPDQTPSQTAFDSQQFINNLQVVFTKVDSAVASFDPDQKPIVDKNDKDNR
QAFNGISQLREEYANKAIKNPTKKNQYFSDFISKSNDLINKDNLIDTDSSTKSFQKFGTE
RYQIFMNWVSHQKDPSKINTQKIRNFMENIVQPPISDDKEKAEFLRSAKQSFAGIIIGNQ
IRSDEKFMGVFEESLDESLDESLDESLDESLDESLDESLDESLKEKQEAQNNGDPGGDWL
DIFLSFAFDKKQSSDLKETLNQESRPNVEQNIATTPTPIQGLPLEARDLLDERGDFSKFT
LGDPNYKFNQLVVHNNALSSMLMGSHGNIKPEKVSLLYGDNGGPEARHDWNATVGYKNQQ
GNNVATLINAHLKNGSGLIIAGNENGINNPSFYLYKKDQLTGLEQALSQEEIQNKLGFME
LLAQNNAKLDNLSKEEKEKFQTEIGNFQKDPKAYLDSLGNDRIAFVSKKDNKHLALVTEF
GNGELSYTLKDYGKRQDRALDREIKTTLQGNLKDDGVMFVNYSNFKYTNASKSPNEGIGA
TNGVSHLEANFSKVAVFNLPKLNGLAVSSFARRNLENKLIAKGFPPKEASKIIKDFLNSN
KELLGKALNFNKAVAEAKNTGNYGGVKKAQKDLEKSIRKRERLEKEITKQFESKSGNKNK
MEAKAQANSQKDEIFKLINEGAYKEARIIAYDQNLKGIRRELRELFDKIENLNKNLKDFG
ESFDALKSGKNKDFSKAEETLKALESSVKDLGINPEWISKVENLNAALNEFKNGKNKDFS
KVTQAKSDLENSIKDVIINQEITDKVDNLNQAVSIAKATGDFSGLDQALAELKNFNVGKN
SDRSEPIYATIDDLDGSSPLKRYAKVDDLSKVGQSDSPEPIYANLGGSSPLKRYAKVDDL
SKVGLSREQELTQKIGNLNQAVSEAKAGSFGNLEQTMHGLKDSTKKNVVNLWFEGARKVP
ISLPSSQAKLDNYATNSHTRINSNVKNGTINEKAIGMLTQKNPEWLKLVNDKIVAHNVGS
TPLSDYDKIGFNQKDMKGYSDSFKFSTKLSNAVKNIKPGFVQCLTDCISAGSYSPKKAEH
GVTKSGFQKS
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgaaaccatcgatcaaacaaaaaatccagatcaaacaccaagccaaacggct
tttgattcacaacaatttatcaataatcttcaagtggttttcactaaagttgatagcgct
gtcgcttcatttgatcccgatcaaaaaccaatcgttgataagaacgataaggataacagg
caagcttttaatggaatctcgcaattaagggaagaatacgccaataaagcgatcaaaaat
cctaccaaaaagaatcagtatttttcagactttatcagtaagagcaatgatttgatcaac
aaagacaatctcattgatacagattcttccacaaagagctttcagaaatttgggactgag
cgttaccaaatttttatgaattgggtgtcccatcaaaaagatccgtctaaaatcaacacc
caaaaaatccgaaattttatggaaaatatcgtacaaccccctatctctgatgataaagaa
aaagcggagtttttgaggtctgccaaacaatcttttgcaggaattatcataggaaaccaa
atccgatcggatgaaaaattcatgggcgtgtttgaagaatctttggatgaatctttggat
gaatctttggatgaatctttggatgaatctttggatgaatctttggatgaatctttggat
gaatctttgaaagagaagcaagaagcacaaaacaatggagatcctggtggggattggctt
gatatttttttatcgtttgcatttgacaaaaaacaatcttccgatctcaaagaaacgctc
aatcaagagtcaaggcctaatgttgaacaaaatatagccactacccccacccccatacaa
ggcttaccgcttgaagctagggatttgcttgatgaaaggggtgatttttctaaattcact
cttggtgatcctaattacaagttcaaccagttagtggttcacaataacgctctgtcttct
atgctaatggggagtcatggcaacataaaacctgaaaaagtttcattgttgtatggggat
aatggtggccctgaagctaggcatgattggaacgccaccgttggttataaaaaccaacaa
ggcaacaatgtggccacactcatcaatgcacatcttaaaaacggcagtgggttaatcata
gcgggtaatgaaaatgggattaacaaccctagcttctatctctacaaaaaagaccaactc
acaggcttggagcaagcgttgagtcaagaagagatccaaaacaaactaggtttcatggaa
cttcttgcacaaaacaacgctaaattagataacttgagcaaggaagagaaagaaaagttc
caaactgagattggaaatttccaaaaagaccctaaggcttatttagactccctagggaat
gatcgcattgcttttgtttctaaaaaagacaacaagcatttagctttggttactgagttt
ggcaatggggaattgagctataccctcaaagattatgggaaaagacaagatagagcttta
gatagggagataaaaaccactcttcaaggtaacctaaaagatgatggcgtgatgtttgtc
aattattccaatttcaaatacaccaacgcctccaagagtcctaatgagggtataggcgct
acgaatggcgtttcccatttggaagcaaattttagcaaggtagctgtctttaatttgcct
aaattaaatggtctcgctgtctctagttttgcaaggcggaatttagagaataaactgatc
gctaaaggatttcccccaaaagaagctagtaagatcatcaaagactttttgaacagcaac
aaggaattgcttggaaaagctttaaacttcaataaagctgtagctgaagctaaaaataca
ggcaattatggcggagtgaaaaaagctcaaaaagatcttgaaaaatctataaggaaacga
gagcgtttagagaaagaaataacgaaacaatttgagagcaagagcggcaacaaaaataaa
atggaagcaaaagctcaagctaacagccaaaaagatgagatttttaagcttatcaatgaa
ggggcttataaggaagcaagaatcatcgcttacgatcagaatcttaaaggcatcaggagg
gaattgagggaattgtttgataaaattgaaaatctcaacaagaatttgaaagactttggt
gaatcttttgatgcgctcaaaagtggcaaaaataaggatttcagcaaggcagaagaaacg
ctaaaagcccttgaaagctcggtgaaagatttgggtatcaatccagaatggatttcaaaa
gttgaaaaccttaatgcagctttgaatgaattcaaaaatggcaaaaataaggatttcagc
aaggtaacacaagcaaaaagcgaccttgaaaattccattaaggatgtgatcatcaatcaa
gagataacggataaagttgacaatctcaatcaggctgtatcaatagctaaagcgacaggc
gatttcagtgggttagatcaagcgctagccgaactcaaaaacttcaatgttggaaaaaat
tctgataggtctgaacccatttacgctacgattgatgatctcgacggatcttcccctttg
aaaaggtatgctaaagttgatgatctcagtaaggtagggcaatcagatagccctgaaccc
atttacgctaatctcggcggatcttcccctttgaaaaggtatgctaaagttgatgatctc
agtaaggtagggctttcaagggagcaagaattgactcagaaaattggcaatctcaatcag
gcagtgtcagaagctaaagcaggttcttttggcaacctagaacaaacgatgcatggactc
aaagattctacaaaaaagaatgttgtgaatctatggtttgaaggtgcaagaaaagtgcct
attagtttgcctagttcgcaagcgaaattggacaattacgctactaacagccacacacgc
attaatagcaatgtcaaaaatggaacaatcaatgaaaaagcgatcggcatgctaacgcaa
aaaaaccctgagtggctcaagctagtgaatgataagatagttgcgcataatgtgggaagc
actcctttgtcagattatgataaaattggattcaaccaaaaggatatgaaaggttattct
gattcgttcaagttttccaccaagttgagcaatgccgtaaaaaacattaagcctggcttt
gtgcaatgtttaaccgattgcatttctgcaggatcttacagcccaaagaaagcggaacat
ggagttacaaaaagtggtttccagaaatcttaa
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