Helicobacter pylori Shi169: HPSH169_06170
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Entry
HPSH169_06170 CDS
T02038
Symbol
alaS
Name
(GenBank) alanyl-tRNA synthetase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
hhq
Helicobacter pylori Shi169
Pathway
hhq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hhq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HPSH169_06170 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hhq01007
]
HPSH169_06170 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhq03016
]
HPSH169_06170 (alaS)
Enzymes [BR:
hhq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
HPSH169_06170 (alaS)
Amino acid related enzymes [BR:
hhq01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HPSH169_06170 (alaS)
Transfer RNA biogenesis [BR:
hhq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HPSH169_06170 (alaS)
Prokaryotic type
HPSH169_06170 (alaS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
ATP-synt_D
DNA_pol3_a_NI
Motif
Other DBs
NCBI-ProteinID:
AFH99896
UniProt:
A0A0E0WDJ5
LinkDB
All DBs
Position
complement(1274212..1276755)
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AA seq
847 aa
AA seq
DB search
MDIRNEFLQFFHNKGHAVYPSMPLVPNDATLLFTNAGMVQFKDIFTGIVPRPSIPRATSS
QLCMRAGGKHNDLENVGYTARHHTLFEMLGNFSFGDYFKEEAILFAWEFVTKNLGFKPKD
LYISVHEKDDETVKLWEKFVPFDRIKKMGDKDNFWQMGDSGPCGPCSEIYIDQGEKHFKG
SEDYFGGEGDRFLEIWNLVFMQYERSNDGVLSPLPKPSIDTGMGLERVQALLEHKLNNFD
SSLFAPLMEEISELTSLDYASEFQPSFRVVADHARAVAFLLAQGVHFNKEGRGYVLRRIL
RRALRHGYLMGLKEAFLYKVVGVVCEQFSNTHAYLKESKEMVMKECFEEEERFLETLESG
MELFNLSLEHLNENKIFDGKIAFKLYDTFGFPLDLTNDMLRSHGACVDMQGFESCMQEQV
KRSKASWKGKQNNADFSTILNAYAPNVFVGYETTECCAKALGFFDSDFKEITEAKPNQEV
WVLLEKTPFYAEGGGAIGDRGALLKDDEEAAIVLDTKNFFGLNFSLLEIKKALKKGDQVI
AQVSDERLEIAKHHSATHLLQSALREVLGPHVSQAGSLVESKRLRFDFSHPKALNDEELE
KVEDSVNAQIFKHLNSQVEHMPLNQAKDKGALALFSEKYAENVRVVSFKEASIELCGGIH
VENTGLIGGFRIVKESGVSSGVRRIEAVCGKAFYQLAKEENKELKNAKTLLKNNDVIAGI
NKLKESVKNSQKAPVSVDLPVEKIHGVNLVVGVVEQGDIKEMIDRLKNKHERLLAMVFKK
ENERITLACGVKNAPIKANVWANEVAQILGGKGGGRGDFASAGGRDIENLQAALNLAKNT
ALKALEG
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggatattcgcaacgaatttttacaattttttcacaataaggggcatgccgtttatcct
agcatgcctttagtgcctaatgacgctaccttgcttttcactaatgccggcatggtgcaa
tttaaagatatttttaccgggattgtgccacgccctagcatccctagagcgacaagttcg
caattgtgcatgcgagcgggtggcaagcataacgatttagaaaatgtcggttataccgca
agacaccacacgctttttgaaatgttagggaatttctcttttggggattatttcaaagaa
gaagcgattttgtttgcgtgggaatttgtaactaagaatttagggtttaagcctaaagat
ttatatatcagcgtgcatgaaaaagacgatgagaccgttaagctatgggaaaagtttgtg
ccttttgacaggattaaaaaaatgggcgataaagataatttctggcaaatgggcgatagc
gggccttgcgggccttgcagtgaaatctacattgatcagggcgaaaaacactttaagggg
agcgaggattattttgggggcgagggcgataggtttttagaaatttggaatttggtgttc
atgcaatacgaacgctctaatgatggcgttttgtcccccttgccaaagcctagcattgat
acaggcatggggttagaaagggtgcaagcgctattagaacacaaactcaataattttgat
tcttcattatttgcgcccttaatggaagaaatcagcgagcttacaagcctggattatgcg
agcgaattccagccaagctttagggtggtagccgatcacgcaagggcggtagcgtttttg
ctcgctcaaggggtgcatttcaataaggaaggccgtggctatgttttaaggcgcatttta
aggcgagccttaaggcatgggtatttaatgggcttgaaagaagcgtttttatacaaagtc
gtgggcgtggtgtgcgaacaattttctaacacgcatgcgtatttgaaagaatctaaagaa
atggtaatgaaggaatgctttgaagaagaagagcgctttttagagactttggaatcgggc
atggaattgtttaacttgtctttagagcatttgaatgaaaataaaatttttgatggcaag
atcgctttcaagctttatgacacttttggttttcctttggacttaacgaacgacatgcta
agaagtcatggggcgtgcgtggatatgcaaggttttgaatcttgcatgcaagagcaagtg
aaacgctctaaagcttcatggaaaggcaaacaaaacaacgctgattttagcactatttta
aacgcttatgcgcccaatgtttttgtggggtatgaaacgacagaatgttgtgctaaagcc
ttagggttttttgatagcgattttaaagaaataacagaggcaaagcctaaccaagaagtc
tgggtcttgctagaaaaaacccctttttacgctgagggtgggggggctataggcgatagg
ggcgcgcttttaaaggacgatgaagaagcggctatagtgttggatacaaaaaactttttt
gggcttaatttttcgctccttgaaatcaaaaaagcgctaaaaaaaggcgatcaagtgatc
gcacaagtgagcgatgagcgcttagaaattgctaaacaccatagcgcgacgcatttattg
cagagtgctttaagagaagttttaggcccgcatgtgagtcaagcagggagtttagtggaa
tccaaacgattgcgttttgatttctcgcaccctaaagcgctcaatgatgaagagttagaa
aaagtagaagattcagttaatgctcaaatcttcaagcacctaaatagccaggtggagcat
atgcccttaaatcaggctaaagataagggagcgttagcgttatttagtgaaaaatacgct
gaaaatgtgcgggtggtgagttttaaagaagcgtccattgaattgtgtgggggcattcat
gtggaaaataccgggctgattggggggtttaggattgtaaaagagagcggggtgagtagt
ggggtcagacgcattgaagcggtgtgcgggaaagccttttaccaactggctaaagaagag
aataaagagcttaaaaacgctaagactttattaaaaaataatgatgtgatagccggcatt
aacaagcttaaagagagcgtgaaaaacagccaaaaagcccccgtttctgtggatttaccg
gttgaaaaaatccatggcgtgaatttagtggtgggcgtagtggaacagggcgacattaaa
gaaatgattgaccgattgaaaaataagcatgaaagattgctcgctatggtgtttaaaaaa
gaaaatgagcgaataactctcgcatgcggggtgaaaaacgcgcccataaaagcgaatgtg
tgggctaatgaagtggcgcaaattttagggggcaaaggaggcggaagaggcgattttgcg
agtgctggaggcagggatattgaaaatttgcaagccgcgctcaatttggcgaaaaatacc
gctcttaaagctttagagggataa
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