Helicobacter pylori Shi169: HPSH169_07625
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Entry
HPSH169_07625 CDS
T02038
Name
(GenBank) DNA repair protein (recN)
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
hhq
Helicobacter pylori Shi169
Brite
KEGG Orthology (KO) [BR:
hhq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhq03400
]
HPSH169_07625
DNA repair and recombination proteins [BR:
hhq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HPSH169_07625
TLS (translesion DNA synthesis) factors
Other SOS response factors
HPSH169_07625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
RsgA_GTPase
AAA_22
AAA_29
Med9
AAA_16
Caldesmon
CbiA
Motif
Other DBs
NCBI-ProteinID:
AFI00180
UniProt:
A0A0E0WDF8
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All DBs
Position
1556294..1557868
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AA seq
524 aa
AA seq
DB search
MRDFNNAQITRLKVRQNAVFEKLDLEFKDGLSAISGASGVGKSVLIASLLGAFGLKESNA
SNIEVELIAPFLDTEEYGIFREDEHEPLVISVIKKEKTRYFLNQTSLSKNTLKALLKGLI
KRLSNDRFSQNELNDILMLSLLDGYIQNQNKAFSPLLGALEEKFTRLEKLEKERRLLEDK
KRFQKDLEERLNFEKMKLEKLDLKEDEYERLLEQKKLLSSKEKLNDKIALALEVLENTHK
ITHALESVGHSAEFLKSALLEASALLEKEQARLEECERLDIEKVLERLGMLSGIIKDYGS
IMHAKERLGHVKNELHNLKEIDNHCETYHKEIEQLKTECLKLCEEISGFRKEYLAGFNAL
LSAKAKDLLLKSPSLVLEEAPMSEKGAQKLVLNLQNSQLETLSSGEYSRLRLAFMLLEME
FLKDFKGVLVLDEMDSNLSGEESLAVSKALETLSSHSQIFAISHQVHIPALAKNHILVFK
ENHKSLAKTLNNEERVLEIARMIGGSENIESAISFAKEKLKAQE
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgcgagattttaataacgctcaaatcacacgcttaaaagtgcgtcaaaacgctgttttt
gaaaaattggatttggagtttaaagacggcttgagcgcgattagtggggctagtggggtg
ggaaaaagcgttcttattgcgagccttttaggggcgtttgggcttaaagagagcaacgct
tcaaacattgaagtggagttgattgcaccctttttagacactgaagaatacggcattttt
agagaagatgagcatgaacccttagtcatcagcgtgatcaaaaaagaaaaaacgcgctat
tttttaaaccaaacaagcctgtctaaaaacacgctcaaagcgttattaaaaggtttgatc
aaacgcctatctaacgacagattcagccagaatgaactcaatgatattttaatgctctcc
ttactggatggctatatccaaaaccaaaacaaggcgtttagcccccttttaggcgcgctt
gaagaaaaattcacccgtttagagaagctagaaaaagaaaggcgattattagaagataaa
aagcgtttccaaaaggatttagaagagcgtttgaattttgaaaaaatgaaattagagaaa
ctggatttaaaagaagatgaatacgaacgccttttagagcaaaaaaaattgctttccagt
aaggaaaaattgaacgataaaatcgctctggcgttagaggtgctagaaaacacccacaag
atcacgcatgctttagagagcgtgggccatagcgctgagtttttaaaaagcgctttatta
gaagcgagcgctctattggaaaaagagcaggctagattagaagagtgcgagcgtttggat
attgaaaaagtgctagaaaggcttggcatgctaagcgggatcattaaggattatgggagt
attatgcatgctaaagaacgattagggcatgttaaaaacgaattgcataacctaaaagaa
attgataatcattgcgaaacttaccacaaagaaatagagcaactaaaaaccgaatgcttg
aaattatgcgaagaaataagcggctttagaaaagagtatttagccggttttaacgctctt
ttaagcgctaaagcgaaagatttgctcctaaaaagccccagtttggttttagaagaagcc
cccatgagcgaaaaaggcgctcaaaaactcgttttgaatttgcaaaattcccaattagaa
accttaagctctggagaatacagccgtttgaggttggcgttcatgcttttagaaatggag
tttttaaaggattttaaaggcgtgttggtgttagatgaaatggattctaatttgagcggt
gaagagagtttggcggtttctaaagcccttgaaaccttgagtagccattcgcaaatcttt
gccatttcgcaccaagtccatatcccagcgctcgctaaaaaccatattttagtcttcaaa
gaaaaccacaaaagcctcgccaaaacccttaataacgaagaaagggttttagaaatcgcg
cgcatgataggggggagcgagaatatagagagcgcgatctctttcgctaaagaaaaatta
aaggcgcaagaatga
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