Helicobacter pylori Shi169: HPSH169_07665
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Entry
HPSH169_07665 CDS
T02038
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hhq
Helicobacter pylori Shi169
Pathway
hhq03030
DNA replication
hhq03430
Mismatch repair
hhq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPSH169_07665
03430 Mismatch repair
HPSH169_07665
03440 Homologous recombination
HPSH169_07665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhq03032
]
HPSH169_07665
03400 DNA repair and recombination proteins [BR:
hhq03400
]
HPSH169_07665
Enzymes [BR:
hhq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPSH169_07665
DNA replication proteins [BR:
hhq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPSH169_07665
DNA repair and recombination proteins [BR:
hhq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPSH169_07665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AFI00188
UniProt:
A0A0E0WCZ6
LinkDB
All DBs
Position
complement(1562801..1563664)
Genome browser
AA seq
287 aa
AA seq
DB search
MSDSLLHKDIQALIARLKHQDLSLGMLEKSLSRLIYDEVNLEYLKACGLNFVETSENLIT
LKNLKTPLKDEVFSFIDLETTGSCPLKHEILEIGAVQVRGGEIINRFETLVKVKSVPDYI
AELTGIAYEDTLNAPSAHEALQELRLFLGNSVFVAHNANFDYNFLGRYFVEKLHCPLLNL
KLCTLDLSKRAILSMRYSLSFLKELLGFGIEVSHRAYADALASYKLFEICLLNLPSYIKT
TMDLIDFSKCANTLIKRPPRARHQETPPPFHLFERTKGLLNIIKATS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagcctcttgcataaagacattcaagccctaatcgctcgcttaaagcaccag
gatttaagcttaggcatgctagaaaaatcgctctctcgccttatttatgatgaagtcaat
ttggaatatttaaaagcgtgcgggcttaatttcgtagaaacgagcgaaaatctaatcacg
ctcaaaaaccttaaaaccccccttaaagatgaggttttttcctttattgatttagaaacc
accggctcttgccccctaaagcatgagattttagaaatcggagccgtgcaagtgaggggg
ggggaaatcatcaatcgttttgaaacccttgtgaaagtcaaaagcgtgcctgattatatc
gctgagcttacaggcatcgcttatgaagacaccctaaacgccccaagcgcgcatgaagct
ttgcaagaattgcgcctttttttaggcaacagcgtgtttgtagcccataacgctaatttt
gattacaactttttagggcgttattttgtagaaaaattgcattgccccttattgaattta
aagctttgcactttggatttatccaaacgagccattttgtccatgcgttattctttgagc
tttttaaaagagcttttagggtttggtatagaagtcagccacagagcctacgcggacgct
ttagcgagctataagctctttgaaatatgcttattaaacttgcccagttacatcaaaaca
acaatggatttgattgatttttccaaatgcgctaacaccttgatcaaaaggcccccaaga
gccagacaccaagagactccaccgccatttcatctttttgagaggacaaagggtttgtta
aatatcataaaagcaaccagttaa
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