Helicobacter pylori Shi417: HPSH417_01125
Help
Entry
HPSH417_01125 CDS
T02039
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
hhr
Helicobacter pylori Shi417
Brite
KEGG Orthology (KO) [BR:
hhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhr03400
]
HPSH417_01125
DNA repair and recombination proteins [BR:
hhr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HPSH417_01125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
Zn_ribbon_LapB
AAA_25
DnaB_C
ChlI
Lon_C
AAA_24
NTPase_1
AAA_14
RecA
Rad51
AAA_16
ATPase_2
AAA_31
ABC_tran
SLFN-g3_helicase
NACHT
nSTAND3
AAA_22
CbiA
AAA_30
LexA_DNA_bind
AAA_5
DAP3
GvpD_P-loop
ArsA_ATPase
NPHP3_N
zf-C2H2_7th_ZNF462
Zeta_toxin
DUF7129
ResIII
AAA
SRP54
MeaB
RsgA_GTPase
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AFH97380
LinkDB
All DBs
Position
219716..221062
Genome browser
AA seq
448 aa
AA seq
DB search
MAKKTSLFECQHCGFTSPKWLGKCVQCNAWESFIELNQTQKEVLNTLKNPIPKAQKSVSI
AEIEHEEVIKFSSTQSELDIVLGGGIAKGGLYLVGGSPGVGKSTLLLKVASGLAKNQQKV
LYVSGEESLSQIKMRATRLDCIEKELYLLNEINWPVIKANIESENYFACVIDSIQTLYSP
EISSAPGSISQVREITFELMRLAKTRNIAVFIIGHITKEGSIAGPRVLEHMVDSVLYFEG
DPSRELRILRSFKNRFGPTSEIGLFEMKEQGLMSAKEASSLFFSQEEPMEGSAITITLEG
SRALILEIQALVSECSFGAPKRLANGFDTNRLNMLIALLEKKLEIPLNRHDVFINVSGGI
KISEPACDLAVIASILSSFKNRKIDNKTAFLGEVSLNGRILEAPNLNARLKEMENYGFLK
AILPKKPNQKTSIKCYEANAVGKIVEWM
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaaaaaacttctttatttgagtgtcagcattgcggttttacaagccctaagtgg
ctaggaaagtgcgttcaatgcaacgcatgggaaagttttatagaattgaaccaaacccaa
aaggaagttttaaacacgcttaaaaacccgatcccaaaagcgcaaaaaagcgtttctatc
gctgaaattgagcatgaagaagtgatcaagttttcttccactcaaagcgagttggatatt
gttttaggtggggggatcgctaaaggggggttgtatttggtgggggggagtcctggggtg
gggaaatccactctgcttttaaaagtggcttctggcttagccaaaaaccagcaaaaggtt
ttgtatgtgagcggggaagagagcttgagccagattaaaatgcgcgccactagattggat
tgcatagaaaaagaattgtatctgctcaatgaaatcaattggcctgtgattaaggcgaat
attgaaagcgaaaattattttgcttgcgtgattgattccattcaaacgctttattcgcca
gagatttcttcagcgcccggctctatttcgcaagtgcgagagatcacttttgagctcatg
cgtttggccaaaacaagaaatattgctgtttttatcatcggtcatatcactaaagaaggg
agcatcgcagggcctagagtgctagagcatatggtggatagcgtgctgtattttgaaggc
gatcccagtagggaattaaggattttaaggagttttaaaaaccgctttggccctacgagt
gaaatcggcttgtttgaaatgaaagagcagggtttaatgagcgctaaagaagcttcaagc
ctgtttttttctcaagaagagcctatggaggggagcgcgattaccatcactttagaaggc
tcaagggcgttgattttagaaatccaggcgttggtgagcgagtgcagttttggagcgccc
aaacgattagcgaacgggtttgacaccaaccgccttaacatgctcatcgctttattagaa
aaaaagctagaaatccccttaaaccgccatgatgtgttcattaatgtgagcggaggcatt
aagattagcgagccggcttgcgatttagcggtcattgccagtatcctttcaagctttaaa
aacagaaaaattgacaataaaacggcgtttttgggcgaagtgagtttgaatggcaggatt
ttagaagcccctaatttgaacgccagattgaaagaaatggaaaattacggctttttaaaa
gccattttgcctaaaaaacctaatcaaaaaacctcgatcaaatgctatgaagccaatgcg
gtgggcaagattgttgaatggatgtga
DBGET
integrated database retrieval system
