Helicobacter pylori Shi417: HPSH417_01200
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Entry
HPSH417_01200 CDS
T02039
Name
(GenBank) prolyl-tRNA synthetase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
hhr
Helicobacter pylori Shi417
Pathway
hhr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hhr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HPSH417_01200
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hhr01007
]
HPSH417_01200
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhr03016
]
HPSH417_01200
Enzymes [BR:
hhr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
HPSH417_01200
Amino acid related enzymes [BR:
hhr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HPSH417_01200
Transfer RNA biogenesis [BR:
hhr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HPSH417_01200
Prokaryotic type
HPSH417_01200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_edit
Motif
Other DBs
NCBI-ProteinID:
AFH97395
LinkDB
All DBs
Position
complement(236082..237815)
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AA seq
577 aa
AA seq
DB search
MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR
MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN
FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA
YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKNCDYAANIEIAKRSK
RPEPLNVPKAQLAKFPTPNTTSAQSVAEFFKTEPYFVLKALVRKVIHKDKETLACFFVRG
DDNLEEVKALNALNLLGANALELREASKEDLNNAGLIAGFIGPYGLKKHVSYIIFDEDLK
EGDCLIVGANEKDFHAVGVDLKGFENLVYADIVQVKESDHCPDCQGELKYHKSLEVGHIF
KLGQGYAKSLKASFLDKNGKERFFEMGCYGIGISRLLSAILEQKSDDLGCVWTKNTAPFD
VVIVVSNWKDEAQKKLAFEVYERLRQKGVDALLDDRDARFGAKMRDFELIGERLALIVGK
QTLESKEFECIKRANLEKRTLKDTELEEKILEMLKSE
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgctattttcaaaactctttgcccccactcttaaagaaccccctaaagatgccgtgtta
aaaagccataaacacttagctcaagcaggatacatttatcaagtaggcagcgggatttat
aattttttgcctttagctaaaaaagtgctagacaagatagaaaacatcacgcacaaacgc
atgcaagagcatggggcgcaaaatattttaatgagttttgtcgttttagcgagtttgtgg
gaaaaatcaggccgtttggataaatacggcaaggaattattggtttttaaagaccgaaaa
gacaatgattttgttttaagccccactttagaagaaaatatcaccgaaattgctgctaat
ttcattaaaagctacaagcaattacccgtccatctctatcaaatccacacgaaattccgt
gatgaaatccgcccacgattcgggttagtgagagcgagggaatttatcatgaaagatggt
tatagctttcatgaagacgctgagagcttggataaggaatttttaaacacgcaaagcgct
tataaagagattttaagcgatttgggtttggattttcgcattgtggaagcggatagcggg
gcgattggagggagtaagagcagggaatttgtcgttttaaccgaatgcggggaagacacg
atcgtggtgtgtaaaaattgcgattatgccgccaacattgaaatcgctaaacgctctaaa
aggcctgagcctttaaatgtcccaaaagcgcaattagcgaaattccctacccctaatacc
accagtgcgcaaagcgtggcggagttttttaaaacagagccttattttgttttaaaagcg
cttgttagaaaagtgatccataaagataaagaaaccctagcgtgcttttttgtcaggggc
gatgacaatttagaggaagttaaagccctaaacgccttgaatcttttaggagcgaacgct
ttagagttaagagaggccagtaaagaagatttaaacaacgcagggttaatagcgggtttt
atagggccttatggcttgaaaaagcatgtttcttacattatctttgatgaagatttaaaa
gagggcgattgtttgatcgttggggctaatgaaaaggattttcatgcggtgggcgtggat
ttaaaagggtttgaaaatcttgtttatgcggatattgtccaggttaaagagagcgatcat
tgccctgattgtcaaggagaattgaaataccataagagtttggaagtggggcatattttc
aaactcgggcaaggctatgctaaaagcttgaaggctagtttcttggataaaaatggtaag
gagcgattttttgaaatggggtgctatgggataggcattagccgattgctcagcgcgatt
ttagagcaaaaaagcgatgatctaggctgtgtatggacgaaaaataccgctccttttgat
gtggtgatcgtggtttctaattggaaagatgaagcgcaaaaaaaactcgcttttgaagtg
tatgaaaggctgcgtcaaaagggcgttgatgcgctgttagacgatagagacgcgcgtttt
ggggcgaagatgagggattttgaattgattggggaacgactagcgctcattgttgggaag
caaactttagagagtaaagaatttgaatgcatcaaacgcgctaatttagaaaaacgaacg
cttaaagacacagaattagaagaaaaaattttagaaatgttaaaaagcgaataa
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