Helicobacter pylori Shi417: HPSH417_01260
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Entry
HPSH417_01260 CDS
T02039
Name
(GenBank) oligopeptide permease ATPase
KO
K13896
microcin C transport system ATP-binding protein
Organism
hhr
Helicobacter pylori Shi417
Pathway
hhr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hhr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HPSH417_01260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hhr02000
]
HPSH417_01260
Transporters [BR:
hhr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
HPSH417_01260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
oligo_HPY
AAA_29
nSTAND1
AAA_16
AAA_22
nSTAND3
AAA_13
DUF87
RsgA_GTPase
Sigma54_activat
MMR_HSR1
P-loop_TraG
FtsK_SpoIIIE
AAA_23
AAA_15
DUF6943
AIG1
Motif
Other DBs
NCBI-ProteinID:
AFH97407
LinkDB
All DBs
Position
complement(247276..248826)
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AA seq
516 aa
AA seq
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MLEIKNLNCVLNAHFSLQNIHISLNPSERVAIVGESGSGKSSIANIIMRLNPRFKPHNGE
VLFETTNLLKESEAFMQHLRGNAIAYIAQDPLSSLNPLHKIGKQMSEAYFLHHKNASKTL
LKEKVLNAMQQVQLDEKFLNRYPYELSGGQRQRVCIAMGIINAPKLLICDEPTTALDAQI
QNQILDLLKQLSVEKNIALLFISHDLKAVKRLADRVYVLKKGEIVETNSTKELFNDPKYE
YSKLLIQASNLPAKNLKALDETLLEVKDFSVYYLQKRFFRPSLKKPLIASVNFSLKAKEN
IGIIGESGSGKSSLALGLLKLALNSGEEKILGQSVGLLNSKAFKPYRKILQMVFQDPYAS
LNPRLSIQSILTEALHFAYPKASKEEWHHLAKLCLEEVCLNPELLNFYAYELSGGERQRV
AIARAIALKPKIILLDEPTSALDKSIQKSVLELLLDLQEKQDLSYLFISHDLDVIKAFCD
KVLVISEGKVVEMGAIKEVFDNPKHAYTKRLLESRL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgctagaaatcaaaaacttaaactgcgttttaaacgcgcatttttcgctccaaaacatc
catatttcgttaaatcctagcgaaagggtggcgatcgtgggcgagagcgggagcgggaaa
agctctatcgctaatatcatcatgcgtttaaaccctagattcaaaccccataatggggag
gtgctgtttgaaacaaccaatcttttaaaagaaagcgaagcatttatgcagcatttaagg
ggtaatgccatagcctacatcgctcaagaccccctatccagcctaaaccccttgcataaa
atcggcaagcaaatgagcgaagcctattttttacaccataaaaacgcttctaaaacgctc
cttaaagaaaaagttttaaacgccatgcagcaagtccaattagatgaaaaatttttaaat
cgttacccttatgaattgagcggagggcagcgccaaagggtgtgtatcgctatgggcatt
attaatgcgcccaaactgctcatttgcgatgagcctaccaccgcattagatgcgcaaatc
caaaaccagattttagacttgctcaagcaattgagcgtggaaaaaaacatcgccctttta
ttcattagccatgatttgaaagcggtcaaacgcttggctgatagggtttatgtgctaaaa
aaaggcgagatagtagaaaccaattccactaaagagctttttaatgaccccaagtatgaa
tattcaaaactcctgattcaagcttcaaacttgcccgctaaaaatttaaaagcgctagat
gagacgcttttagaggtgaaagattttagcgtttattacttgcaaaaacgcttttttagg
ccttctttaaaaaaaccccttatcgcatcagtcaatttctccctcaaagctaaagaaaac
atcggcatcattggcgaaagcgggagcgggaaaagctctttagcgttagggcttttaaaa
ctcgctttaaatagcggggaagaaaagattttaggccaaagcgtggggcttttaaattct
aaggcgttcaaaccctaccgcaagattttgcaaatggtgtttcaagacccttacgcatca
ttaaaccctcgcttaagcattcaaagcattttaacagaggctttgcactttgcttaccct
aaagcttccaaagaagaatggcaccatctcgcaaaactttgtttagaagaagtgtgttta
aaccctgaattgcttaacttttacgcttatgaactcagcggtggggagcgccaaagagtg
gcgatcgctagagcgattgccttaaaacctaaaatcattcttttagatgagcccacttct
gctttagataaaagcattcaaaaaagcgtgttggaattgctgttggatttacaagaaaag
caggatttgagctatttgtttatcagccatgatttggatgtgatcaaagcgttttgcgat
aaggtgttagtgataagtgaggggaaagtcgtagaaatgggcgctattaaagaggtgttt
gacaaccctaaacacgcttatacgaagcgtttgttggaatctaggctttaa
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