Helicobacter pylori Shi417: HPSH417_01510
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Entry
HPSH417_01510 CDS
T02039
Name
(GenBank) periplasmic dipeptide-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
hhr
Helicobacter pylori Shi417
Pathway
hhr02010
ABC transporters
hhr02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
hhr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HPSH417_01510
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
HPSH417_01510
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hhr02000
]
HPSH417_01510
Transporters [BR:
hhr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
HPSH417_01510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
FlhF_N
Motif
Other DBs
NCBI-ProteinID:
AFH97455
LinkDB
All DBs
Position
304334..305983
Genome browser
AA seq
549 aa
AA seq
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MNNVFVKSLFFFLLLFGFFLKASENPNATLNPSKENVSVKEQKRFGGVLVFARGADGSSM
DPALVTDGESYVATGNIYDTLVQFKYGTTEIEPALATSWEISPDGLVYTFHLRKGVYFHQ
TKYWNKKVEFSAKDVLFSFERQMDKAKRYYNPGAKSYKYWEGMGMSHIIKSIEALDDYTI
RFTLNGPEAPFLANLGMDFLSILSKDYADYLEQNNKKDELAKKPVGTGPFKFFLWNKDEK
IILLKNQDYWGPKAYLDKVVVRTIPNPSTRALALRTGEIMLMTGPNLSEVEQLEKVPNIV
VDKSAGLLASWLSLNTQKKYFNNPLVRLAINHAINVDDYIKVLYEGFAQKMVNPFPPTIW
GYNYNIKPYEYDLKKAKELLKQAGYPNGFKTTIFTTATRNPKGAVFIQASLAKIGIDVKI
EVYEWGAYLKRTGLGEHEMAFAGWMADIADPDNFLYTLWSKQAASAIPTQNGSFYKSDAF
SDLLLKAKRVSDQKEREALYLKAQEIIHKDAPYVPLAYPYSVVPHLSKVKGYKTTGVSVN
RFFKVYLEK
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgtttttgttaagagtttgtttttttttcttttgttgtttgggttcttttta
aaagcttcagaaaacccaaacgctactcttaatccctctaaagagaatgtttctgttaaa
gagcaaaagcgttttggaggcgttttagtttttgctagaggcgctgatggctcaagcatg
gatcctgccttagtaactgatggcgaaagctatgtggcaacgggcaatatttatgacacg
ctcgtgcaattcaaatacggcaccacagaaattgaacccgccttagcgacaagctgggaa
atatccccggatggtcttgtatatacctttcatttacgcaaaggggtttatttccaccag
acgaagtattggaataaaaaagtagagtttagcgctaaagatgtgctgttttcgtttgag
cgccagatggataaggctaaacgatactataacccgggggctaaaagctataagtattgg
gaaggcatgggcatgtctcatattattaagagcattgaagctttagatgattacaccatt
agattcacgcttaatgggccagaagctccgtttttagccaatttaggcatggattttttg
agcattttgagtaaggattacgctgattatttagaacaaaataataaaaaagacgagttg
gctaaaaaacctgttgggacagggcctttcaaattctttttgtggaataaagatgaaaaa
atcattcttctaaaaaatcaggattattgggggcctaaagcttatttggataaagtggtg
gtgcgcaccattcctaatccttccactcgtgctttggcgttgcgcaccggtgaaatcatg
ctcatgaccgggcctaaccttagtgaagtggagcaattagaaaaagtccctaatatcgtg
gtggataaaagtgctgggttgttggcgagttggctttcattaaacacgcaaaaaaagtat
tttaacaaccctttagtgcgtttagctatcaaccatgcgattaatgttgatgattacatc
aaagtgctttatgaaggctttgcccaaaaaatggttaatcctttcccgcccaccatatgg
ggttataactacaacatcaaaccctatgaatacgatttgaaaaaggctaaggaattattg
aagcaagcggggtatcctaatggctttaaaaccactatttttaccactgccacccgtaac
ccaaaaggagcggtgttcatacaagcgagcctggctaaaattggcattgatgtgaaaatt
gaagtgtatgagtggggggcttatttgaaaagaacgggtctgggcgagcatgaaatggcg
tttgcaggctggatggcagacattgcggatccggataatttcttatacaccttatggagc
aagcaagcagcctcagctatacccactcaaaatggttccttttataagagcgacgccttt
tcagatcttcttttaaaggctaaacgggtttctgatcaaaaggagagggaagctctttat
ttaaaggctcaagaaattatccataaagatgcgccctatgtgcctttagcctacccttat
tcggtggtgccgcacttgtctaaagttaagggttataagacgactggagtgagcgtgaat
cggttttttaaggtgtatttagaaaagtaa
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