Helicobacter pylori Shi417: HPSH417_02040
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Entry
HPSH417_02040 CDS
T02039
Name
(GenBank) hypothetical protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
hhr
Helicobacter pylori Shi417
Pathway
hhr00540
Lipopolysaccharide biosynthesis
hhr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hhr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HPSH417_02040
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hhr01005
]
HPSH417_02040
Enzymes [BR:
hhr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
HPSH417_02040
Lipopolysaccharide biosynthesis proteins [BR:
hhr01005
]
Core region
HPSH417_02040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
AFH97561
LinkDB
All DBs
Position
403610..404899
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AA seq
429 aa
AA seq
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MLKERLKAFFSADSVFTLIFALFFLTSFKKPLTQVLLIVLMFFLFLRCYFQASLKETFRI
NHLKTMPFKWLTLAFWGVFLSIFPNMFNMHDSQTFRYNLFALNMSLTYACGALCLLFASC
LRIKLNQKILFYSMAVANFINGLLSLVQKIYFNMPRAQGFSTVKEYVVLVSVSILGCYIY
ALYSRNQKEKLFFTLSVFVGFLVVILSATRSATIAFVMTFLILSCFILYAKKSLKPLGYM
VVVSLILSALYMGSSALEKKGAIEQSRVQNQSFEEDLKRYAKKDADSSIGWRLERWKEAL
TVLRLRPFFGMAASEKCQRLEEILSLSHSYRAKDLILCYERYDNQIIHVLATRGIIGFLI
WLFFLLVIVKIFWSGIKQNSLISLFILTTLTFYLVFGIGFDPFDFFITGSFFVGMVMMAV
FLKKDKSVF
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
gtgttgaaagagcgtttgaaagccttttttagtgcggactctgtcttcactttaattttt
gcccttttctttctcacttcgtttaaaaagcctttaactcaagtcttattgattgtttta
atgttttttttgtttcttaggtgttatttccaagcgtctttgaaagagacctttagaatt
aatcatctaaaaacaatgcctttcaaatggcttactctagctttttggggcgtgttttta
agcatcttccctaacatgtttaacatgcatgatagccaaactttccgctacaatttattc
gctctaaacatgtccttaacttatgcttgcggggcgttatgcttgctttttgccagttgt
ttaagaatcaaattgaatcaaaaaatccttttttacagcatggctgttgccaatttcatc
aacggcttgctttcattggtgcaaaaaatttattttaacatgcccagagcgcaagggttt
agcacggttaaggagtatgtggttttagtgagcgtttccattttaggctgttatatttat
gcgctttattcgcgcaatcaaaaagagaaactttttttcacgctttctgtttttgtgggg
tttttagtcgttattttaagcgctacaaggagtgcgacaatcgcttttgttatgactttt
ttaatcctttcttgctttattttatacgccaaaaaatcgctcaaaccattgggttatatg
gtggttgtgagtcttattttgagcgctttgtatatggggagtagtgctttagaaaaaaag
ggggcaatagagcaatctagggttcaaaaccaaagctttgaagaagatttgaaacgctac
gctaaaaaagacgctgatagcagtatcgggtggcgtttggagcgctggaaagaagcccta
acggttttgcgtttaaggcccttttttggtatggctgctagcgagaaatgccagaggtta
gaagagattttatctttatcgcattcttacagagccaaagatttgattctttgttatgaa
agatacgacaaccaaatcattcatgttctagccactagggggatcataggctttttaatc
tggctcttttttttattagtcattgtaaagattttttggagcgggataaagcaaaactct
ttaatctcactctttatattaacaacgctcactttttacctcgtttttggtatcgggttt
gacccctttgatttcttcattacgggaagtttttttgtaggaatggtcatgatggctgtt
tttttaaaaaaggataaaagcgttttttag
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