Helicobacter pylori Shi417: HPSH417_02355
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Entry
HPSH417_02355 CDS
T02039
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
hhr
Helicobacter pylori Shi417
Pathway
hhr00470
D-Amino acid metabolism
hhr00550
Peptidoglycan biosynthesis
hhr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hhr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPSH417_02355 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HPSH417_02355 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hhr01011
]
HPSH417_02355 (murD)
Enzymes [BR:
hhr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HPSH417_02355 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
hhr01011
]
Precursor biosynthesis
Amino acid ligase
HPSH417_02355 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
DUF3531
Motif
Other DBs
NCBI-ProteinID:
AFH97624
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Position
470899..472167
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AA seq
422 aa
AA seq
DB search
MKISLLGHGKTTLALGRFFRKNHNEVKFFDDQFTSSFKDREGFVCYPSKDFNPNDSQLEI
VSPGISFTHPLVIKAKHLVSEYDYIDSLFDLVFTPTIISISGTNGKTTTTEMLTMLLEDF
KAVSGGNIGTPLIELFEKQSPLWVLETSSFSLHYTNKAYPLIYLLINVEADHLTWHCNFE
NYLNAKLKVLTLMPKTSLAILPLKFKEHSSVQNSQAQKIFFDKSEEVLERLKIPSNALLF
KGAFLLDAALALLVYEQFLKIKNLKWQDYRENALKKLNAFKVGSHKMEEFRDKQGRLWVD
DSKATNIDATLQALKTFKNQKIHLILGGDIKGVNLTPLFEEFKNYEVSLYAIGSSAFIIQ
ALALEFNVSCRVCLELEKAVQEIKSVLSQNEIALLSPSAASLDQFSSYKERGERFKAFVL
KD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatctctttattggggcatggcaaaaccactctagctttagggcgtttttttaga
aaaaaccataacgaagtcaaattttttgacgaccaattcacttcatcttttaaagataga
gagggttttgtttgctatcccagtaaggatttcaaccctaatgattcccaactagagata
gtcagccctggcattagtttcacgcaccctttagtgataaaagccaagcatttagtgagc
gaatacgattatattgatagcttgtttgatttggttttcacgcctactataataagtatt
agcggcactaatggtaaaaccaccacgacagaaatgctcaccatgcttttagaagatttt
aaggctgtgagtggggggaatatcggcacgcccttgattgaattgtttgaaaaacaatcg
cccttatgggtgttagaaacaagctccttttctttgcattataccaataaggcttaccct
ttaatctacttgctcatcaatgtggaagccgatcatttgacctggcattgcaattttgaa
aattatttgaacgctaaactcaaggttttaacattgatgcctaaaacttcgctcgctatc
ctccctttaaaattcaaagaacattcaagcgttcaaaattcgcaagcgcaaaaaatcttt
tttgacaaaagcgaagaggttttagagcgtttaaaaatcccttctaacgcccttttgttt
aagggagcgtttttattagacgctgccttagcccttttagtttatgagcaatttttaaaa
ataaagaatttaaaatggcaagattatagagaaaacgcccttaaaaaactgaacgctttt
aaagtcggctcgcataaaatggaagaatttagggataaacaagggcgtttgtgggtagat
gacagcaaagccacgaacattgatgccaccttgcaagccctaaaaacctttaaaaaccaa
aaaatccatttgattttagggggcgatattaaaggggtcaatttaacccccctttttgaa
gaatttaaaaattatgaagtaagcctttatgcgataggatcaagcgcttttatcatccaa
gccttagcgttagaatttaatgtttcttgtcgggtttgtttggagttagaaaaagcggtt
caagaaattaaaagcgttttatcgcaaaatgaaatcgctttgctttccccaagcgcagcc
agtttggatcaattttcttcgtataaagaaaggggtgaaagatttaaggcgtttgtttta
aaagattaa
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