KEGG   Helicobacter pylori Shi417: HPSH417_02580
Entry
HPSH417_02580     CDS       T02039                                 
Name
(GenBank) cag pathogenicity island protein CagI
  KO
K12104  cag pathogenicity island protein 19
Organism
hhr  Helicobacter pylori Shi417
Module
hhr_M00564  Helicobacter pylori pathogenicity signature, cagA pathogenicity island
Brite
KEGG Orthology (KO) [BR:hhr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hhr02044]
    HPSH417_02580
Secretion system [BR:hhr02044]
 Type IV secretion system
  Cag pathogenicity island (PAI) protein
   HPSH417_02580
SSDB
Motif
Pfam: Bin3
Other DBs
NCBI-ProteinID: AFH97669
LinkDB
Position
complement(520261..521400)
AA seq 379 aa
MKYFLSIFSFLTFLFLNGGEVVITLEPALKAIQADAQAKQKTAQAELKAIEAQSNAKEKA
IQAQIEGELRTQLATMSAMLKGANGVINGVNGMTGGFFAGSDILLGIMQGYSSALSALGG
NVKMIVEKQKINTQTEIQNMQIALQKNNEMIKLKMNQQNALLEALKNSFEPSVTLKTQME
MLSQALGSSSDNTKYIAYNTIGIKAFEETLKGFETWLKVAMQKATLIDYNSLTGQALFQS
AIYEPALSFFSSMGAPFGIIETFTLAPTKCPYLDGLKISACLMEQVIQNYRKIVALIQNK
LNDADFQNIAYLNGINEEIKTLKGSVDLNALIEVAILNAENHLNYIENLEKKADLWEEQL
KLERETTARNIASSKVIVK
NT seq 1140 nt   +upstreamnt  +downstreamnt
gtgaagtattttttaagcatattttctttcttaacttttttgtttctgaatggtggagag
gtagtaataacgcttgaacctgccttaaaagccattcaagcggatgcacaagccaaacaa
aaaaccgctcaagccgaattaaaagccatagaggctcaatctaatgccaaagaaaaagcc
attcaagcgcaaatagagggagaattgaggactcagcttgcaactatgagcgctatgtta
aaaggggctaatggcgttattaatggtgtcaatggcatgacaggggggttttttgcaggt
tcagacatcttgcttggcatcatgcaagggtattcaagcgcgcttagcgcattgggggga
aatgtcaaaatgatcgtggaaaaacaaaaaattaatacccaaacagaaatccaaaacatg
caaatcgcgctccaaaaaaataacgaaatgatcaagctcaaaatgaaccagcaaaacgct
ctcttagaagcgttaaaaaacagctttgaaccgagcgttaccctaaaaacacaaatggaa
atgctttctcaagctctaggaagttcttctgacaacactaaatacatcgcttacaatacg
attggtatcaaggcgtttgaagaaaccttaaaaggttttgaaacatggttgaaagtggct
atgcaaaaagcgacccttattgactacaattccctaacaggtcaggctttgtttcaaagc
gccatctacgagcctgctcttagttttttttcaagcatgggcgcaccatttggaatcatt
gaaacatttactctagcacccacaaaatgcccctatcttgatgggctaaaaatttcagca
tgccttatggaacaggttattcagaattacagaaagattgtagcccttattcaaaataaa
ctgaatgatgcagattttcaaaatatcgcttatttgaatgggatcaatgaagaaatcaaa
accttaaaaggatcagtagatttgaatgcgctcatagaagttgctatcttaaacgcagaa
aatcatttaaactatatagagaatcttgaaaaaaaagccgacctttgggaagaacaactg
aaattagagagagaaacgacagcaagaaacattgctagctctaaagttattgtcaaatga

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