KEGG   Helicobacter pylori Shi417: HPSH417_02585
Entry
HPSH417_02585     CDS       T02039                                 
Name
(GenBank) cag island protein
  KO
K12105  cag pathogenicity island protein 20
Organism
hhr  Helicobacter pylori Shi417
Module
hhr_M00564  Helicobacter pylori pathogenicity signature, cagA pathogenicity island
Brite
KEGG Orthology (KO) [BR:hhr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hhr02044]
    HPSH417_02585
Secretion system [BR:hhr02044]
 Type IV secretion system
  Cag pathogenicity island (PAI) protein
   HPSH417_02585
SSDB
Motif
Pfam: Mersacidin
Other DBs
NCBI-ProteinID: AFH97670
LinkDB
Position
complement(521411..522523)
AA seq 370 aa
MAGTQAIYESSSAGFLSQISSIISSTSGVAGPFAGIVAAAMTAAIIPTVVAFTNPQMTAI
MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
QIGAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
LALQEQLRSQASNSSMNDTADSLDSCTALGALASSSKVFFSCMQISMTPMSVSMPTVYAK
YQALATNALTSGVNPMTTPACPTGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
ERVQTKIIVK
NT seq 1113 nt   +upstreamnt  +downstreamnt
atggcaggcacacaagctatatatgaatcatcttctgcaggcttcttatcgcaaatctca
tcaatcatctcaagcacaagtggtgttgcagggccatttgcaggaatagtggcggctgct
atgacagcagcgattattcctactgttgtggcatttactaatccgcaaatgaccgctatc
atgacacaatacaatcagagcatcgctgaagccgtaagcatgcctatgaaagccgctaac
caacaatacaaccaattgtatcaaggttttaacgatcaaagcatggctgtggggaataat
atcttaaatattagcaaattaacaggggaatttaacgcgcaaggcaacacgcaaggcgcg
caaattggtgctgttaatagtcagattgcaagcattttagcgagtaacactacccctaaa
aatcccagtgctattgaagcttatgcgacgaatcaaatcgctgttcctagtgtgccaaca
acggttgaaatgatgagcggtatcttaggcaatattacaagcgcagcaccaaaatacgcc
ctagccctacaagagcaactgcgttctcaagcaagcaacagctcaatgaatgatacagcc
gattcccttgatagctgtaccgctttgggtgcgcttgctagctcatcaaaagtgtttttt
agttgcatgcaaatttctatgactcctatgagtgtctctatgcccactgtttatgccaaa
taccaagcattagccactaatgccctaacttcaggcgttaatcctatgaccactcctgca
tgccctactggggacaaagttcttgtcgtttattgctatgctgaaaaagtagcagaaatt
ttgagagagtactatatagaatttgtgaaaaacaataccaatttgttgcaaaacgcttct
caaatgatacttaatcaatcaggattagctactagcacctatgacacccaagcgatttct
aacataagctcgctatataactacaatatagtagcgaataaatcttttttgaaatcgcat
ctgacttatcttgattacatcaaagacaaacttaaggggcaaaaagatagctacctaaca
gaaagggtgcaaactaaaataatcgtgaagtga

DBGET integrated database retrieval system