KEGG   Helicobacter pylori Shi417: HPSH417_02610
Entry
HPSH417_02610     CDS       T02039                                 
Name
(GenBank) cag pathogenicity island protein CagC
  KO
K12110  cag pathogenicity island protein 25
Organism
hhr  Helicobacter pylori Shi417
Module
hhr_M00564  Helicobacter pylori pathogenicity signature, cagA pathogenicity island
Brite
KEGG Orthology (KO) [BR:hhr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hhr02044]
    HPSH417_02610
Secretion system [BR:hhr02044]
 Type IV secretion system
  Cag pathogenicity island (PAI) protein
   HPSH417_02610
SSDB
Motif
Pfam: T4SS_CagC
Other DBs
NCBI-ProteinID: AFH97675
LinkDB
Position
complement(527404..527751)
AA seq 115 aa
MKFLTRITDSYKKVVVTLGLVITTNPLMAVSSPAAGITETKSLVVQIISVLAIVGGCALG
VKGIADIWKISDDIKRGQATVFAYAQPIAMLAVAGGIIYLSTKFGFNIGEGGGAS
NT seq 348 nt   +upstreamnt  +downstreamnt
atgaaatttcttacaagaatcactgacagctacaagaaagttgtagtaactttagggcta
gtgataacaaccaatcctttaatggcggtcagcagtcctgcagcaggcattactgagact
aaatctttggttgttcagatcatttctgttttagcgatcgtaggtggttgcgctctaggg
gtcaaaggcatagcagatatttggaaaatctctgatgacattaaaagaggtcaggcgact
gtttttgcttatgcacagcccatagctatgttagcggtggcaggcggtattatctatttg
agcactaagtttggcttcaatattggcgagggtggaggagctagctaa

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