KEGG   Helicobacter pylori Shi417: HPSH417_02715
Entry
HPSH417_02715     CDS       T02039                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
hhr  Helicobacter pylori Shi417
Pathway
hhr00300  Lysine biosynthesis
hhr00470  D-Amino acid metabolism
hhr01100  Metabolic pathways
hhr01110  Biosynthesis of secondary metabolites
hhr01120  Microbial metabolism in diverse environments
hhr01230  Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:hhr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    HPSH417_02715 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HPSH417_02715 (dapF)
Enzymes [BR:hhr01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     HPSH417_02715 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: AFH97696
LinkDB
Position
complement(545534..546355)
AA seq 273 aa
MVFYKYSGSGNDFLIVQSFKKKDFSNLAKQVCNRHEGFGADGLVVVLPSKDYDYEWDFYN
SDGSKAGMCGNASRCVGLFTYQHAIASKNHVFLAGKREISICIEEPNIIESNLGNYKILD
VIPALRCKKFFTNDSVLENIPTFYLIDTGVPHLVGFVKNKEWLNSLNTLELRALRHAFNA
NINIAFIENKETIFLQTYERGVEDFTLACGTGMAAVFIAARIFYNTPKKAALIPKSSESL
ELSLKNDEIFYKGTVRYIGMSVLGMGVFDRYFL
NT seq 822 nt   +upstreamnt  +downstreamnt
atggtgttttacaaatattcagggagcgggaatgattttttaatcgttcaaagcttcaaa
aaaaaagatttttcaaatttagccaaacaggtgtgtaataggcatgagggttttggggct
gatgggcttgtagtcgtcttaccgagtaaggattacgactacgaatgggatttttacaat
tcagacggctctaaagctggcatgtgcgggaatgcgagccgttgcgtggggttatttacc
taccagcatgctatagcctctaaaaaccatgtttttttagccggaaaaagagagatttct
atttgcatagaagaacccaatatcatagagagcaatcttggtaactataaaatcctagat
gtgatacccgctttaagatgcaaaaaattttttaccaacgacagcgttttagaaaatatc
cctactttctacctcatagatacaggagtgccgcatttagtgggatttgtgaaaaataaa
gagtggttaaattcccttaacacgctggaattaagggctttaaggcatgcgtttaacgct
aatattaacatcgcttttatagaaaataaagagacgatttttttacaaacttatgaaaga
ggggttgaagatttcacgctagcttgcgggacgggcatggcggcggtttttatcgctgcg
cgcattttttataacacgcctaaaaaagccgctctcatccctaaaagcagtgaatcttta
gagctttctttaaaaaatgatgaaattttttataagggcacggtgcgttatattggcatg
agtgttttgggcatgggtgtttttgatcgttatttcttgtaa

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