Helicobacter pylori Shi417: HPSH417_03100
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Entry
HPSH417_03100 CDS
T02039
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hhr
Helicobacter pylori Shi417
Pathway
hhr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPSH417_03100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhr03019
]
HPSH417_03100
Enzymes [BR:
hhr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HPSH417_03100
Messenger RNA biogenesis [BR:
hhr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HPSH417_03100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
RuvA_C
Motif
Other DBs
NCBI-ProteinID:
AFH97771
LinkDB
All DBs
Position
631929..633095
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AA seq
388 aa
AA seq
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MFELDKELKELFDIYEKSSHELYLVGGCVRDCLMGITPKDYDLTSNALVNESKELLLKHH
FRVLETGIKHGTITALKNNQSYEITTFRIEKGHIKHRKPKELVFSARLTDDLKRRDFSMN
AIAYSPTKGIIDPFKGQNAIENQMIECVGEVRLRFFEDALRILRALRFSATLGFKIAPST
KEAIFAYKDLLKHLSKERLQSELNKFLMGKNAYEVAKEYQEILELVTQEKIESLGFLKSA
PFNLELRLLGFFKHQKSLENLRYPKKTCVLFLKAKECHKAFLNIHNKTGLKFLLKNYDLE
PFNLALDFYALKNPKRALKIKSLLKEIFNANEPFKKEHLALKGGTLQNLGYQRQQIGEIL
NACLNLVIAHPENNSLERLVEWVRDRGY
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgagttagacaaagaattaaaagaattgtttgacatttatgaaaaatcctctcat
gagctttacttggtaggggggtgcgtgcgcgattgtttgatgggaattacccctaaagac
tacgatttaacttcaaacgctttagtcaatgaaagtaaagaacttcttttaaaacaccat
tttagggtgctagaaaccggcatcaagcatggcacgatcacggctcttaaaaacaatcaa
agctatgaaatcacaacctttagaattgaaaaagggcatatcaagcaccgaaagcctaaa
gaattggtttttagcgctcgtttaacagacgatttaaagcggcgcgattttagcatgaat
gcgatcgcttatagccctacaaaagggattattgatccttttaaggggcaaaatgcgatt
gaaaatcaaatgattgaatgcgtgggggaagtgcgattgaggttttttgaggacgcttta
aggattttaagagcgttgcgatttagcgcgactttaggctttaagatagcgccaagcact
aaagaagcgatttttgcgtataaggatttgttaaaacatctttctaaagagcgcttacaa
agtgaattgaataagtttcttatggggaaaaacgcctatgaagtggctaaagagtatcaa
gaaattttagagttggttactcaagagaaaatagaaagtttagggtttttaaaaagtgcg
cctttcaatctggaattaagattgttagggttttttaaacaccaaaaaagtttagaaaat
ttacgataccctaaaaaaacttgtgttttatttttaaaagctaaagaatgccataaagct
tttttaaatattcataacaaaacaggattaaaatttttattaaaaaactacgatctagag
ccttttaatttggctttagatttttacgcgctcaaaaaccccaaacgcgctttaaaaatt
aaaagcttgttaaaagaaatatttaacgctaacgagccttttaaaaaagaacacctagcc
cttaagggcgggacgcttcaaaatttgggctaccagcgccaacaaatcggcgaaatcttg
aacgcatgcctaaatttagtcatcgctcaccctgaaaataattctttagaacgcttggtg
gagtgggtgagggataggggttattga
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