Helicobacter pylori Shi417: HPSH417_03145
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Entry
HPSH417_03145 CDS
T02039
Name
(GenBank) hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hhr
Helicobacter pylori Shi417
Pathway
hhr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hhr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPSH417_03145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhr03400
]
HPSH417_03145
Enzymes [BR:
hhr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HPSH417_03145
DNA repair and recombination proteins [BR:
hhr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPSH417_03145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFH97780
LinkDB
All DBs
Position
641500..642078
Genome browser
AA seq
192 aa
AA seq
DB search
MGETYTNINLTKPQNKPLNKQVYEGIENCNLCKRHQNSKPVIGLFNPTSKLTFITLTPML
DSQLNFLNNLKAAMLESIIQKVFNCPLKDCSILSLLKCDSNSLNLEEEINACLFHLTWQL
DNSASKVIVVFGEILPQRLLNLSKEESFGRIVSLKTKHFLSTHALEDMLKNPTLKKEALA
HFKTALQFLNQS
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
ttgggtgaaacttacaccaatatcaaccttaccaagccccaaaataagccccttaacaaa
caagtttatgagggtatagaaaattgcaatctgtgcaaacgccatcaaaattcaaaaccg
gtgattgggctttttaaccccacttccaagctcactttcatcacgctaacccccatgctg
gatagccaattgaatttcttaaacaatttaaaagcggccatgttagagagcattatccaa
aaagtttttaactgccccttaaaagattgcagtattttatcgctccttaaatgcgactct
aacagccttaatttagaagaagaaatcaacgcatgcctatttcatttaacctggcaatta
gacaacagcgcttcaaaagtcattgtggtatttggcgagattttgccccaacgcctttta
aacctttctaaagaagaatcctttgggcgcatcgtgtctttaaaaacaaaacatttttta
agcacccatgctttagaggacatgctcaaaaaccccacgctcaaaaaagaagcgttagcg
cattttaaaacagcgctccaatttcttaaccagtcttaa
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