Helicobacter pylori Shi417: HPSH417_03365
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Entry
HPSH417_03365 CDS
T02039
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hhr
Helicobacter pylori Shi417
Brite
KEGG Orthology (KO) [BR:
hhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhr03032
]
HPSH417_03365
03400 DNA repair and recombination proteins [BR:
hhr03400
]
HPSH417_03365
Enzymes [BR:
hhr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HPSH417_03365
DNA replication proteins [BR:
hhr03032
]
Prokaryotic type
DNA Topoisomerases
HPSH417_03365
DNA repair and recombination proteins [BR:
hhr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPSH417_03365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Retrotran_gag_2
CsgA
Motif
Other DBs
NCBI-ProteinID:
AFH97822
LinkDB
All DBs
Position
694665..697145
Genome browser
AA seq
826 aa
AA seq
DB search
MQDNLINETKNIVEVGIDSSIEESYLAYSMSVIIGRALPDARDGLKPVHRRILYAMHELG
LTSKVAYKKSARIVGDVIGKYHPHGDNAVYDALVRMAQDFSMRLELVDGQGNFGSIDGDN
AAAMRYTEARMTKASEEILRDIDKDTIDFVPNYDDTLKEPDILPSRLPNLLVNGANGIAV
GMATSIPPHRIDEIIDALVHVLENPNAGLDEILEFVKGPDFPTGGIIYGKAGIIEAYKTG
RGRVKVRAKVHVEKTKNKEIIVLDEMPFQTNKAKLVEQISDLAREKQIEGISEVRDESDR
EGIRVVIELKRDAMSEIVLNHLYKLTTMETTFSIILLAIYNKEPKIFTLLELLRLFLNHR
KTIIIRRTIFELEKAKARAHILEGYLIALDNIDEIVRLIKTSQSPEAAKDALMERFTLSE
IQSKAILEMRLQRLTGLERDKIKEEYQNLLELISDLNGILKSEDRLNKVVKTELLEVKEQ
FSSQRCTEIQEVYENIDIEDLIANEPMVVSMSYKGYVKRVDLKAYERQNRGGKGKLSGNT
YEDDFIENFFVANTHDILLFITNKGQLYRLKVYKIPEASRIAMGKAIVNLISLAPDEKIM
ATLSTKDFSDERSLAFFTKKGVVKRTNLSEFDSNYNGMRAIVLDEGDELVSAKIVDKNAK
HLLIASYLGLFIKFPLEDVREIGRTTRGVRGIRLNENDFVVGAVVINDDSNKLLSVSENG
LGKQTLAEAYREQSRGGKGIIGMKLTQKTGNLVSVISVDDENLDLMILTASAKMIRVSIK
DIKETIGRNTSGVKLIDTADKVVYANSCPKEEEPENSENPPTQLFE
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataatttaatcaatgaaacaaaaaatattgtagaagtggggattgattcttct
attgaagagagctatttagcttattcaatgagcgtgatcatagggcgcgctttaccggac
gctagagatggcttaaaacccgtgcataggcgtattttgtatgcgatgcatgaattaggc
ctcacttccaaagtcgcttataaaaaaagcgctaggatcgtgggtgatgtgattggtaaa
taccacccccatggcgataacgcggtttatgatgcactagtgagaatggcgcaagatttt
tctatgcgtttggaattagtggatgggcaaggcaactttggctctattgatggcgataac
gctgcagcgatgcgttacactgaagccagaatgaccaaggcgagtgaagaaattttaagg
gatattgataaagacaccattgattttgtgcctaattatgatgacaccttaaaagagccc
gatattttaccaagccgtctgcctaatcttttagtcaatggggctaatgggatcgctgta
gggatggcgacttctatcccccctcacaggattgatgaaatcatagacgctttagtgcat
gtcttagaaaaccctaatgctggattagatgaaattttagaatttgtcaaagggcctgac
tttcccactggcgggatcatttatggcaaggcgggtattattgaagcctataaaacgggg
cgagggcgcgtgaaagtgcgcgccaaagtgcatgtggaaaagacgaaaaataaagaaatc
atcgttttagatgaaatgccttttcaaaccaataaagccaaattagtggaacaaatcagc
gatttagcgcgagaaaaacaaattgaaggcattagcgaagtgcgcgatgaaagcgataga
gagggcattagagtggtgattgaattaaaaagagacgcgatgagcgaaattgtcttaaac
cacctctacaaactcaccaccatggagaccacttttagcatcattttactcgctatttac
aataaagagcctaagattttcacgcttttagagttgttgcgcctttttttaaaccacaga
aaaaccattattataagacgcactatttttgaattagaaaaggctaaggccagagcgcat
attttagagggctatttgatcgcattagacaatattgatgaaatcgtgcgactcattaaa
acaagccaaagcccagaagcggctaaagacgccttaatggagcgttttactttgagcgaa
atccagagcaaagccattttagaaatgcgtttgcagcgcttaacaggccttgaaagagat
aaaatcaaagaagaataccaaaacttgttagagcttattagtgatctcaatggcatttta
aagagcgaagatcgcttgaataaagtcgtcaaaacagagcttttagaagtcaaagagcaa
ttttcttctcaaaggtgcactgagattcaagaagtttatgaaaatattgacatagaagat
ttgatcgctaatgagcctatggtggtgagcatgagctataaaggctatgtgaaaagagtg
gatttgaaagcttatgaaaggcaaaatcgtggcggtaagggcaagctttcaggcaacact
tatgaagacgatttcattgaaaacttttttgtggctaacacgcatgatattttgctcttt
atcaccaacaaggggcagttgtatcgtttgaaagtctataagatcccggaagcgagccgg
atcgctatgggtaaagccatcgtgaatttaatctcgctcgctcctgatgaaaagatcatg
gcgactctaagcaccaaagactttagcgatgaacgctctttagctttcttcaccaaaaaa
ggtgtggtgaagcgcaccaacttgagcgaatttgacagcaactataacggtatgagagcg
attgttttagatgagggcgatgaattggtgagcgcaaaaattgtggataaaaacgccaag
catttactcatcgcatcgtatttgggccttttcattaaattccctttagaagatgtgcgc
gagattggaagaactactcgtggggttagagggatcaggctgaatgaaaatgattttgtt
gtcggcgcggtcgttattaacgatgacagcaacaagcttttgagcgtgagtgaaaacggg
cttggcaagcaaactttagccgaagcgtatagagagcaatctcgtggaggtaagggtatc
attggcatgaagctcactcaaaagaccggcaatctagtgagcgttatcagcgtggatgat
gaaaacttggatttgatgatccttactgcaagcgcgaaaatgatcagagtttctattaaa
gacattaaagaaaccatcggaagaaataccagtggggtaaaactcatagacactgccgat
aaagtcgtgtatgccaattcttgccctaaagaagaagagccagaaaattcagaaaaccct
cccacgcaattgtttgagtga
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