Helicobacter pylori Shi417: HPSH417_03440
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Entry
HPSH417_03440 CDS
T02039
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hhr
Helicobacter pylori Shi417
Pathway
hhr03030
DNA replication
hhr03430
Mismatch repair
hhr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPSH417_03440
03430 Mismatch repair
HPSH417_03440
03440 Homologous recombination
HPSH417_03440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhr03032
]
HPSH417_03440
03400 DNA repair and recombination proteins [BR:
hhr03400
]
HPSH417_03440
Enzymes [BR:
hhr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPSH417_03440
DNA replication proteins [BR:
hhr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPSH417_03440
DNA repair and recombination proteins [BR:
hhr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPSH417_03440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_14
AAA_5
RCF1-5-like_lid
DNA_pol3_gamma3
AAA_30
DEAD
AAA_19
AAA_assoc_2
ResIII
Motif
Other DBs
NCBI-ProteinID:
AFH97837
LinkDB
All DBs
Position
complement(711826..713550)
Genome browser
AA seq
574 aa
AA seq
DB search
MQVLALKYRPKHFSELVGQESVAKTLSLALDNQRLANAYLFSGLRGSGKTSSSRIFARAL
MCEKGPKAVPCDTCTQCQSALNNHHIDIIEMDGASNRGIDDVRNLIEQTRYKPSFGRYKI
FIIDEVHMFTTEAFNALLKTLEEPPSHVKFLLATTDALKLPATILSRTQHFRFKKIPENS
VISHLKTILEKEQVSYETSALEKLAHSGQGSLRDTITLLEQAINYCDNTITESKVAEMLG
AIDRSVLEDFFQSLINQDEVQLQERYAILENYETESVLEEMMLFLKAKLLSPDAYSILLI
ERFFKIIMSGLSLLKEGANASFVLLLLKMKFKEALKLKALDDAILELEQSKESVLKPLNQ
NANAFKQEQKNAEKIESAEKIEKPEKKENTETPQTPMLSAKDRIFHNLFKQVQTLVYERN
YELGAVFEKNIRFIDFDSQTKTLTWESLATHKDKELLRERFKIVKSIVDGVFGKGETIKI
ALKNHSENKSALEVVKEFKFPYSKPKPTTETMAEMKEKDTKEAAEKETKENDTREVQETQ
PKETPTALQEFMANHSDLIEEIKSEFEIKSVELL
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttttagcgttaaaataccgccccaaacattttagcgagctagtcggtcaagag
agcgtggctaaaacgctttctttagccctagacaaccagcgtttggctaacgcttattta
ttcagcgggttaagaggttcaggcaaaaccagctcttctaggatttttgctagggcttta
atgtgtgaaaaagggccaaaggctgtgccttgcgatacttgcacccaatgccagagtgct
ttaaacaaccaccatatagatattatagaaatggacggggcgtctaatagggggattgat
gatgtccgtaatctcatagagcaaacgcgctacaaaccaagttttgggcgctataaaatc
tttatcattgatgaagtgcatatgttcaccaccgaagcgtttaacgcgcttttaaaaact
ttagaagagcctcctagccatgtgaaattccttttagctacaacggacgccttgaaattg
cccgctaccatactcagccgcacccagcatttccggtttaaaaaaatccctgaaaattcc
gttatttctcatttaaaaaccattttagaaaaagaacaagtgagctatgaaacaagcgcg
ttagaaaaactggctcacagcgggcaggggagcttgagggatacgatcactcttttagag
caagccatcaattattgcgataacactatcacagaaagcaaagtggctgaaatgttagga
gcgattgatcgaagcgttttagaagatttttttcaaagcctaatcaaccaagatgaagtg
caattgcaagagcgttatgccattttagaaaattatgaaaccgagagcgttttagaagaa
atgatgctttttttgaaagcgaaattattaagccctgatgcttattccatccttttaata
gagcgcttttttaaaatcattatgagcggtttgagccttttaaaagaaggggctaatgcc
agttttgtgctgttgttattgaaaatgaaattcaaagaagctttgaaactcaaagcccta
gacgatgcgattttggaattagagcaaagtaaagaaagcgttttaaagcccttaaaccaa
aacgctaacgcctttaaacaagaacaaaaaaacgcagaaaaaatagagagcgcagaaaaa
atagaaaagccagaaaaaaaagaaaacacagaaaccccgcaaacccccatgctttcagct
aaagatcgcatttttcacaaccttttcaagcaagttcaaacattggtttatgagcgcaat
tacgaattaggggcggtgtttgaaaaaaatatccgtttcattgattttgacagccagact
aaaaccttgacttgggagtctttagccacccataaagataaagagcttttaagagagcgt
tttaaaatcgtgaaaagtatcgttgatggggtttttggcaagggcgaaactatcaaaatc
gctttaaaaaatcattcagaaaataaaagcgctttagaagtggttaaagagtttaaattc
ccttattcaaagcccaaaccaaccaccgaaacgatggctgaaatgaaagaaaaagacact
aaagaggcggctgaaaaagaaactaaagaaaacgacactagagaagttcaagaaacccaa
ccaaaagaaacccctacagccttgcaagaattcatggctaatcattccgatctcattgaa
gagattaagagcgagtttgaaatcaaaagcgtggaattgttatga
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