Helicobacter pylori Shi417: HPSH417_03535
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Entry
HPSH417_03535 CDS
T02039
Name
(GenBank) hypothetical protein
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hhr
Helicobacter pylori Shi417
Brite
KEGG Orthology (KO) [BR:
hhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hhr03009
]
HPSH417_03535
Enzymes [BR:
hhr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HPSH417_03535
Ribosome biogenesis [BR:
hhr03009
]
Prokaryotic type
ribosomal protein modification factors
HPSH417_03535
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Rotavirus_VP3
CLP1_P
DUF2981
Oxidored_nitro
Motif
Other DBs
NCBI-ProteinID:
AFH97851
LinkDB
All DBs
Position
complement(726875..728194)
Genome browser
AA seq
439 aa
AA seq
DB search
MQIKENKQLCLISLGCSKNLVDSEVMLGKLYNYTLTNDTKSADVILINTCGFIESAKQES
IQTILNAAKDKKKGAILIASGCLSERYKDEIKELIPEVDIFTGVGDYDKIDIMIAKKQNQ
FSEQVFLSEHYNARIITGSSVHAYVKISEGCNQKCSFCAIPSFKGKLQSRELDSILKEAE
NLALKGYTDMTFIAQDSSSFLYDKGQKDGLIQLIRAIDKQQALKSARILYLYPSSTTLEL
IGAIESSPIFQNYFDMPIQHISDSMLKKMRRNSSQAHHLKLLNAMKQVKESFIRSTIIVG
HPEENEGEFEELSAFLDEFRFDRLNIFAFSAEENTHAYSLEKVPKKIINARIKALNKIAL
KHQNNSFRALLNKPIKALVENKEGEYFYKARDLRWAPEVDGEILINDSELATPLKPGHYT
IMPSAFKDNILLAKVLSPF
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattaaagaaaacaaacagctctgcttaatttcattaggttgctctaaaaatttg
gtggattcagaagtgatgttaggcaagctttataactacacgctcactaatgacactaag
agcgctgatgtgattttgatcaacacttgcggttttattgaaagcgccaaacaagagagt
atccaaaccattctaaacgccgctaaagacaaaaaaaagggagcgattttgattgcgagc
gggtgcttgagcgagcgctataaagatgaaatcaaagaattgatccctgaagtggatatt
tttaccggtgtgggggattatgacaagattgatataatgattgctaaaaaacaaaaccag
ttcagcgagcaagtgtttttaagcgagcattataacgcgcgcatcatcacgggatcgagc
gtgcatgcgtatgttaaaatttctgagggttgcaatcaaaaatgctctttttgcgctatc
cctagctttaaggggaaattacaaagcagggaattagactctattttaaaagaagcggaa
aatctcgcgcttaaaggctatacggatatgacttttatcgctcaagactctagctccttt
ttatacgataaggggcaaaaagacggcttgatccagcttattagagcgattgacaagcag
caagccttaaagagcgctcgcatcttatacctctacccttctagcaccacgctagagctt
attggcgcgattgaaagttcgcccatttttcaaaattattttgacatgcccatccagcat
atcagcgactccatgcttaaaaaaatgcggcgcaactccagccaagcgcaccatttaaag
cttttaaatgccatgaagcaggttaaagaaagttttatcagaagcacgatcattgtaggg
catccggaagaaaatgaaggcgaatttgaggaattgagcgcgtttttggacgagttccgg
tttgaccggttgaatatttttgctttcagcgctgaagaaaacacgcatgcctattcttta
gagaaagtgcctaaaaaaatcatcaacgctcgcattaaagccttgaataaaatcgctcta
aaacaccaaaacaattcctttagggctttgttaaataaacccattaaggcgttagtggaa
aataaagagggcgagtatttttacaaagcaagggatttgagatgggcacctgaagtggat
ggggaaatcttaatcaacgacagcgaactagccacccccttaaaacccgggcattatacg
attatgcctagcgcatttaaagacaatattttactcgctaaggttttaagccctttttaa
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