Helicobacter pylori Shi417: HPSH417_04045
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Entry
HPSH417_04045 CDS
T02039
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
hhr
Helicobacter pylori Shi417
Brite
KEGG Orthology (KO) [BR:
hhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhr03032
]
HPSH417_04045
03036 Chromosome and associated proteins [BR:
hhr03036
]
HPSH417_04045
03400 DNA repair and recombination proteins [BR:
hhr03400
]
HPSH417_04045
DNA replication proteins [BR:
hhr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HPSH417_04045
Chromosome and associated proteins [BR:
hhr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HPSH417_04045
DNA repair and recombination proteins [BR:
hhr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HPSH417_04045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AFH97949
LinkDB
All DBs
Position
822641..822925
Genome browser
AA seq
94 aa
AA seq
DB search
MNKAEFIDLVKEAGKYNSKREAEEAINAFTLAVETALSKGESVELIGFGKFETAEQKGKE
GKVPGSDKTYKTEDKRVPKFKPGKILKQKVEEGK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcggaatttattgatctggttaaagaagcgggtaaatacaacagcaaaaga
gaagccgaagaagcgatcaacgcctttactctagcggtagaaacggctttaagcaagggt
gaaagcgtggaattgattggttttggcaaatttgagaccgcagaacaaaaaggcaaagaa
ggtaaagtgccaggaagcgataaaacttataaaactgaagacaagcgagtgcctaaattc
aaacccggcaaaatccttaaacaaaaagttgaagaaggcaagtaa
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