Helicobacter pylori Shi417: HPSH417_04170
Help
Entry
HPSH417_04170 CDS
T02039
Name
(GenBank) ABC transporter, ATP-binding protein
Organism
hhr
Helicobacter pylori Shi417
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_18
RsgA_GTPase
AAA_22
AAA_28
AAA
TsaE
AAA_15
MMR_HSR1
RNA_helicase
AAA_23
AAA_16
Rad17
AAA_33
AAA_24
MeaB
AAA_14
AAA_17
RuvB_N
nSTAND3
DUF87
NACHT
NPHP3_N
CLP1_P
DUF815
NTPase_1
Roc
IstB_IS21
NB-ARC
Cytidylate_kin
YqeC
Motif
Other DBs
NCBI-ProteinID:
AFH97970
LinkDB
All DBs
Position
complement(844121..845722)
Genome browser
AA seq
533 aa
AA seq
DB search
MLQTINLTQRYATKKLFENVNIKLDKNKRYGLIGANGAGKSTFLKILSKSIDCSSGEVII
TSGMRMGVLGQDQYAFEDLSLKDAVLIGNKRLYEAIKEKERLYTEGDLSDDKVNARLGEL
ETICVEEDPMYECEVVIEKILEDLGIPSSRHNDLMKTLPSSDKFKILLAQVLFPKPDILL
LDEPTNNLDLNAIEWLENNLKRHEGTMVVISHDRHFLNAVCTHILDLDFHSVREFSGNYD
DWYIASTLMVKQQEAERNKKLKEKEELEKFIARFSANASKAKQATSRQKQLDKLDIQSLA
VSSRRDPSIIFKPKRTIGNEALECENISKSYDGQIVLNQVSLKVMPKDKIALIGPNGVGK
STLCKILVEELKPDTGVVKWGATVSKGYFPQNVSEEISGEETLYQWLFNFNKKIESAEVR
NALGRMLFNGEEQEKCVNALSGGEKHRMVLSKLMLEGGNFLVLDEPTNHLDLEAIIALGE
ALFKFDGAVICISHDRELIDAYANRIIELVPSPKGASIIDFKGSYEEYLASKK
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgctacaaaccatcaacttaacgcaacgctatgcgactaaaaaattgtttgagaatgtg
aatatcaagctggataaaaacaaacgctacgggctgattggggctaatggtgcaggaaaa
tccacttttttaaagattttaagcaagagcattgattgtagcagtggggaagtcatcatc
acaagcgggatgagaatgggggttttagggcaggatcaatacgcttttgaagatttgagc
cttaaagatgcggttttgataggcaataagcgtttgtatgaggctatcaaagaaaaagag
cgcttatacactgaaggcgatttgagcgatgataaagtgaatgctaggctaggggagtta
gaaaccatttgcgtagaagaagaccccatgtatgaatgcgaagtggtgattgaaaaaatc
ctagaagacttaggcattcctagctccaggcacaatgatttgatgaaaaccttgccaagc
agcgataaatttaaaatccttctcgctcaagttttattccctaaaccggatattttgctt
ttagatgagccgaccaacaacctggatttaaacgccattgaatggctagaaaacaacctc
aaacgccatgaaggcacgatggtagtcatcagccatgacaggcattttttaaatgcggta
tgcacgcatattttggatttggattttcacagcgtgcgcgaatttagcgggaattatgac
gattggtatatcgcttctactttgatggttaaacagcaagaggccgaacgcaataaaaaa
ctcaaagaaaaagaagagctagaaaaattcatcgctcgttttagcgctaacgcttctaag
gccaagcaagccaccagccgccaaaaacaactagataaattagacattcaaagcttagcg
gtatctagcaggagggatcctagcattatttttaaacctaaaagaaccattggtaatgaa
gctttagagtgcgaaaacatctctaaaagttatgacgggcaaattgttttaaatcaagtg
agcttgaaagtgatgcctaaagacaagatcgccctcatagggccaaacggcgtgggtaaa
tccacgctttgtaagattttagtagaagagttaaagccggatacgggcgtggtgaaatgg
ggagcgaccgtttcaaaaggctatttccctcaaaatgtgagcgaagaaatcagcggggaa
gaaaccttgtatcaatggctttttaatttcaataaaaagattgaaagcgcagaggtgaga
aacgctttagggaggatgctttttaatggcgaagagcaagaaaaatgcgtgaacgcttta
agcgggggcgaaaaacaccgaatggttttatccaagctcatgctagaaggggggaatttc
ttagtcttagatgagccaaccaaccacctagatttagaagccattatcgctttaggtgaa
gcactctttaaatttgatggggcggtaatttgcataagccatgacagagagctcattgat
gcgtatgctaatagaatcattgaattagtcccaagccctaaaggcgcttcaatcattgat
tttaagggcagttatgaagagtatttagcgagcaaaaaatga
DBGET
integrated database retrieval system
