Helicobacter pylori Shi417: HPSH417_04315
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Entry
HPSH417_04315 CDS
T02039
Symbol
cysS
Name
(GenBank) cysteinyl-tRNA synthetase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
hhr
Helicobacter pylori Shi417
Pathway
hhr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hhr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HPSH417_04315 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hhr01007
]
HPSH417_04315 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhr03016
]
HPSH417_04315 (cysS)
Enzymes [BR:
hhr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
HPSH417_04315 (cysS)
Amino acid related enzymes [BR:
hhr01007
]
Aminoacyl-tRNA synthetase
Class I (G)
HPSH417_04315 (cysS)
Transfer RNA biogenesis [BR:
hhr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HPSH417_04315 (cysS)
Prokaryotic type
HPSH417_04315 (cysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
DALR_2
tRNA-synt_1
tRNA-synt_1d
tRNA-synt_1f
tRNA-synt_1c
CysS_C
Motif
Other DBs
NCBI-ProteinID:
AFH97999
LinkDB
All DBs
Position
873769..875166
Genome browser
AA seq
465 aa
AA seq
DB search
MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYEV
VLVRNFTDIDDKIINKALKENKSVQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAM
VGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGLVQEKRLEQDFVL
WKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHEN
EACQTRCAFGVELAKYWMHNGFVNINNEKMSKSLGNSFFIKDALKNYDGEILRNYLLGVH
YRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKKEILECMQDDLNISKALSV
LESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKDPVEYFQLGVSGSEKQEIE
NKIEERKRAKEQKDFLKADNIREELLKQKIALMDTPQGTIWEKFF
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtttatttatgataccaaattaaaacaaaaagtcccttttgagcctttagttgaaaaa
aaggcgaatatttatgtgtgcgggcctacggtgtatgatgacgctcatttagggcatgct
aggagcgcgattgcttttgatttgttaaggcgcacgcttgaattgagcggctatgaagtg
gtgctagtaaggaatttcacggatattgacgataagatcatcaacaaagccctaaaagaa
aacaaaagcgttcaagaattaagcagcatttatattgaatcttacacgagggatttaaac
gctttgaatgtgaaaaaacccagcctagagcctaaagcgagcgagtatttagacgctatg
gtgggcatgattgaaacgcttttagaaaaaaatatcgcttatcagatctctaatggggat
atttatttagacacgagcaaggataaagattacggatctttgagcgtgcataatagcagt
attgaatttggccgtattggtttggtgcaagaaaaacggcttgaacaggattttgtgtta
tggaaaagctataagggggataatgatgtgggttttgatagccctttaggcaaagggcgc
cctggctggcatatagaatgctctagcatgatctttaaaactttagcgctcactgacacc
ccttatcaaattgacatccatgcaggcggagcggatttgttattcccccaccatgaaaat
gaagcgtgccaaacccgttgcgcctttggcgtggagcttgctaaatactggatgcataat
ggctttgtgaatatcaataacgaaaaaatgtctaaaagtttagggaatagcttttttatt
aaagacgccctcaaaaactatgatggcgaaattttgcgcaattacttgctaggggtgcat
tatcgctctgttttgaatttcaatgaagaagacttgttagtgagtaaaaaacgcttggat
aaaatctatcgtttaaaacagcgcgttttagggactcttggaggaataaatccaaacttt
aaaaaagaaattttagaatgcatgcaagacgatttaaacatttctaaagcgttgagcgtt
ttagaaagcatgctttcttctactaatgaaaaactggatcaaaaccccaaaaacaaggct
ttgaaaggcgaaattttagcgaatttaaaattcatagaagaactgcttggcatcgggttt
aaagaccctgtagaatatttccaattaggcgtgagtgggagcgaaaaacaagaaattgaa
aacaagatagaagaaaggaaacgcgccaaagagcaaaaagattttttaaaagccgataac
atcagagaagagcttttgaaacaaaaaatcgctttgatggacaccccacaaggcacgatc
tgggagaagtttttttaa
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