Helicobacter pylori Shi417: HPSH417_04510
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Entry
HPSH417_04510 CDS
T02039
Name
(GenBank) geranyltranstransferase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
hhr
Helicobacter pylori Shi417
Pathway
hhr00900
Terpenoid backbone biosynthesis
hhr01100
Metabolic pathways
hhr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hhr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
HPSH417_04510
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hhr01006
]
HPSH417_04510
Enzymes [BR:
hhr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
HPSH417_04510
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
HPSH417_04510
Prenyltransferases [BR:
hhr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
HPSH417_04510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AFH98037
LinkDB
All DBs
Position
927402..928313
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AA seq
303 aa
AA seq
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MNNPNLSFYYNECERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCA
LVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVL
IGDALNTYSFELLSNSLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLT
FLHEHKTAKLISASLMMGFVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEEES
GKTTHLDGAKNSFVNLLGLEKASGYAQTLKTEVLDDLNLLKPAYPLLQENLNALLNTLFK
GKT
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaataaccctaatttatccttttattataatgagtgcgagcgttttgaaagcttttta
aaccaccatcatttacaccttgaaagcttccacccttatttggaaaaagccttttttgaa
atggtgcttaatgggggtaaaaggttccgccctaagctttttttagccgtgctttgcgcg
ttagtgggtcaaaaagattattctaaccagcaaacagaatattttaaaatcgctttaagc
attgaatgcttgcacacttattcgctcatccatgacgatttaccatgcatggataatgcc
gctttaaggagaaaccaccccactttacacgctaaatacgatgaaaccacagccgtttta
atcggcgatgcgctcaacacttactcttttgaattgctttcaaactctttactagaaagc
catatcattgtggaattgatcaaaatcttaagcgctaatggggggattaaaggcatgatc
ttagggcaggctttggattgctattttgaaaacacgcccttaaatttagaacagctcact
ttcttacacgagcataaaaccgctaaattgattagcgcaagcttgatgatggggtttgtt
gcaagcggtattaaagatgaagagctttttaaatggcttcaggcttttgggttaaaaatg
ggtctttgctttcaagtgttagacgatattatagatgttacacaagatgaagaagaaagc
ggtaaaaccactcatttagacggcgctaaaaacagctttgtgaatttattggggctagaa
aaggcaagcggttacgctcaaactttaaaaacagaggttttagacgatttaaacctacta
aaacccgcttatcctttattgcaagaaaatttaaacgcattattgaacactctgtttaaa
ggcaagacatga
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