Helicobacter pylori Shi417: HPSH417_04900
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Entry
HPSH417_04900 CDS
T02039
Name
(GenBank) hypothetical protein
KO
K16052
MscS family membrane protein
Organism
hhr
Helicobacter pylori Shi417
Brite
KEGG Orthology (KO) [BR:
hhr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hhr02000
]
HPSH417_04900
Transporters [BR:
hhr02000
]
Other transporters
Pores ion channels [TC:
1
]
HPSH417_04900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
AFH98115
LinkDB
All DBs
Position
complement(1021266..1023107)
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AA seq
613 aa
AA seq
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MSLFLNPLRAVEEHGTDAIDLFLIFNQINQLNQVIETYKKNPERSAEISLYNTQKNDLIR
SLTSKVLNERDKIGIDINQNLKEQEKIKKRLSRSIKGDDFYTFMKDRLSLDILLIDEILY
RFIDKIRSSIDIFSEQKDVESISDAFLLRLGQFKLYTFPKNLDNVKMHELERMFSDYELR
LNTYTEVLRYIKNHPKEVLPKNLIMEVNMDFVLNKISKVLPFTAHSLQVSKIALALMILA
LLLGLRKLITWLLALLLDWIFEIMQRNKKMHVNVQKSIVSPVSVFLALFSCDVALDIFYY
PNASPSKVSMWVGAVYIMLLAWLVIALFKGYGEALVTNVATKSTHNFRKEVINLILKVVY
FLIFIVTLLGVLKQLGFNVSAIIASLGIGGLAVALAVKDVLANFFASVILLLDNSFSQGD
WIVCGEVEGTVVEMGLRRTTIRAFDNALLSVPNSELAGKPIRNWSRRKVGRRIKMEIGLT
YSSSQSALQLCVKDIKEMLENHPKIANGADSALQNASDYRYMFKKDIVSIDDFLGYKNNL
FVFLDQFADSSINILVYCFSKTVVWEEWLEVKEDVMLKIMGIVEKHHLSFAFPSQSLYVE
SLPEVSLKERAKI
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
ttgtcattgtttttaaatcctttgagggcggttgaagagcatggaacagatgcgattgat
ttgtttttgattttcaatcaaatcaaccaactcaatcaagtcattgaaacttacaagaaa
aaccctgaaagaagtgctgaaatctctctgtataacacccaaaagaatgacttgattaga
agtttgacttctaaagtgttgaatgaaagagataaaattggcattgacatcaatcaaaat
ttaaaagagcaagagaaaatcaaaaagcgtttgtctagaagcattaagggcgatgatttc
tacactttcatgaaagacagattgtctttagatattttgttgatagatgaaattttgtat
cgttttatagataaaatcaggagcagtattgatatttttagcgaacaaaaagatgtggaa
agtatcagcgatgctttccttttgcgtttagggcaattcaaactctacactttccctaaa
aatttagacaatgtcaaaatgcatgaattagagcgtatgtttagcgattatgaattgcgt
ttgaacacttataccgaagtcttgcgttacatcaaaaaccaccctaaagaagtgcttcct
aaaaacttgatcatggaagtgaatatggattttgtgttaaacaaaatcagcaaggtcttg
cctttcacagcccatagcttgcaagtgagtaagattgcgcttgctttgatgattttagct
ctattgctaggtttaaggaagttgatcacttggcttttagctttattgctggattggatt
tttgaaatcatgcaacgcaataaaaaaatgcatgtcaatgtgcaaaaaagcattgtttcg
ccggtttctgtctttttagccctgtttagttgcgatgtggctttagatattttctactac
cctaacgcatcgccctctaaagtttctatgtgggtgggcgcggtgtatatcatgctttta
gcgtggttagtgatagcgctttttaaaggctatggggaagcgttagttacgaatgtggct
accaaaagcacgcacaattttagaaaagaagtgatcaacttgattttaaaagtcgtgtat
tttttgatctttattgttacgcttttaggggttttgaaacaactggggtttaatgtttca
gccatcatcgcttctttagggattggggggttagcggtggctttggcggttaaagatgtg
ttggcgaatttttttgcttctgtcattttattattagacaattcgttttctcaaggggat
tggattgtgtgtggtgaagtggagggcacggtggtggaaatggggttaagacgcaccacg
atcagagcctttgataacgctcttttgtccgtgcctaattcagaattagccggaaaaccc
atcaggaattggagccgccgtaaagtgggaaggcgtattaaaatggaaataggcttaact
tatagctccagtcaaagtgctttacagctttgcgtcaaagacattaaagaaatgttagaa
aaccaccctaaaatcgctaatggagccgatagcgctttgcaaaatgcgagcgattaccgc
tacatgtttaaaaaagatattgtttctattgatgattttttagggtataaaaacaatttg
tttgtttttttagaccagtttgcggacagctctatcaatattttagtgtattgcttttct
aaaacagtggtttgggaagagtggctagaagtcaaagaagatgtgatgttaaaaatcatg
gggattgtagaaaagcaccatttgagttttgctttcccatcacagagcttgtatgtggag
agtttgccagaagttagcctgaaagaaagggctaaaatctaa
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