KEGG   Helicobacter pylori Shi417: HPSH417_05460
Entry
HPSH417_05460     CDS       T02039                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hhr  Helicobacter pylori Shi417
Pathway
hhr02024  Quorum sensing
hhr03060  Protein export
hhr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hhr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    HPSH417_05460
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HPSH417_05460
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HPSH417_05460
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hhr02044]
    HPSH417_05460
Enzymes [BR:hhr01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     HPSH417_05460
Secretion system [BR:hhr02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   HPSH417_05460
  Eukaryotic Sec-SRP protein
   HPSH417_05460
SSDB
Motif
Pfam: SRP54 SRP_SPB CbiA SRP54_N AAA_31 Zeta_toxin AAA_22 AAA_30 nSTAND3 AAA_24 AAA_17 cobW NPHP3_N SLFN-g3_helicase AAA_19 6PF2K APS_kinase AAA_16 ArsA_ATPase AAA_14 Fer4_NifH AAA T2SSE AAA_11 AAA_33 NTPase_1 ABC_tran Thymidylate_kin ParA ResIII KTI12 NACHT AAA_5 ParBc AAA_18 TsaE MraZ PhageMin_Tail ATP_bind_1 YqeC
Other DBs
NCBI-ProteinID: AFH98224
LinkDB
Position
complement(1134782..1136128)
AA seq 448 aa
MFQALSDGFKNALNKIRFQDDGKALDRALDELKKTLLKNDVHHKVARELLKKVESQTKLN
GIGKQQFLDALEKSLLEILSAKGSSGFTFAQTPPTVVLMAGLQGSGKTTTTAKLAHYLKT
KNKKVLLCACDLQRLAAVEQLKVLGEQVGVEVFYEENKSVKEIANNALKRAKEAQFDVLL
VDSAGRLAIDKELMQELKEVKEVLNPHEVLYVADALSGQDGVKSASAFNEEIGVSGVVLS
KFDSDSKGGIALGITYQLGLPLRFIGSGEKIPDLDVFVPERIVGRLMGAGDIISLAEKTA
SVLNPNEAKDLSKKLKKGQFTFNDFLNQIEKVKKLGSMSSLISMIPGLGNMANALKDTDL
ESSLEVKKIKAMVNSMTKKEQENPEILNGSRRKRIALGSGLEVSEINRIIKRFDQASKMA
KRLTNKKGISDLMNLMSQAKNQTPPKMR
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgtttcaagcactaagcgatgggtttaaaaacgcactcaataaaatccgctttcaagat
gatggaaaagcgctagatcgggcgttagatgaattgaaaaaaacgctcttaaaaaatgat
gtgcatcataaagtggctagggaattgctcaaaaaagtggaaagtcaaacgaaacttaat
ggcattggtaagcagcaatttttagacgctttggaaaagagtttgttagaaattttaagc
gctaaagggagcagtggttttactttcgctcaaacgccccctaccgtggttttaatggca
ggtttgcaagggagcggtaagacaaccaccaccgctaaactcgctcattatctaaaaacc
aaaaataaaaaagtgcttttatgcgcatgcgatttgcaacgcctagcggcagtagagcaa
ttaaaggttttgggcgaacaggtgggcgtggaagttttttatgaagaaaataaaagcgtg
aaagaaatcgctaacaacgctttaaaaagggctaaagaagcgcaatttgatgttttgctc
gtggatagcgcggggcgtttagccattgataaagagcttatgcaagaattaaaagaagtt
aaagaagtcttaaacccccatgaagtgctgtatgtcgcagacgccttgagcgggcaagat
ggggtcaaaagcgcgagcgcatttaatgaagaaataggcgtgagtggggtggtgttaagc
aaatttgatagcgattctaaagggggtatcgccttaggcatcacttaccaattaggttta
cccttgcgttttattgggagcggggaaaaaatccctgatttagatgtgtttgtgcctgaa
aggattgtggggcgtttgatgggggctggagatattatctcgctcgctgaaaaaaccgcc
agcgttttaaaccctaatgaagccaaagatttaagcaaaaaactcaaaaaagggcaattc
acattcaatgactttttaaaccagattgaaaaagtgaaaaaattaggctctatgagttct
ctaatctctatgattccaggtttagggaatatggcaaacgcgctaaaagacacggattta
gaaagctctttagaagtgaaaaaaatcaaagctatggtcaattccatgaccaaaaaagag
caagaaaaccccgagattttaaacggcagccgaagaaaaaggatcgctttagggagcggc
ttagaagtgtctgaaatcaatcgcatcatcaaacgctttgatcaagcgagcaaaatggcg
aaacgcttaacgaataaaaagggcattagcgatttgatgaatctaatgagtcaggctaaa
aatcaaacgccccctaaaatgcgttga

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