Helicobacter pylori Shi417: HPSH417_05715
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Entry
HPSH417_05715 CDS
T02039
Name
(GenBank) outer membrane protein HofH
Organism
hhr
Helicobacter pylori Shi417
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HP_OMP_2
Motif
Other DBs
NCBI-ProteinID:
AFH98267
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All DBs
Position
1193065..1194480
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AA seq
471 aa
AA seq
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MKKASQVLFFGAFLSSSLQGFEAKLNGFVDQSSTIGFNQHKINKERGIYPMQQFATIAGY
LGLGFSLLPKKVSDHVLKGKIGGMVGSIFYDGTKKFEDGSVSYNLFGYYDGFMGGYTNIL
QTDSLETQNMKYNKNVRNYVFSDAYLEYRYKDHFEFKGGRYLSGMPFRSGQTQGFQVSGQ
YKHARLTWFSSFGRAFAYGSFLMDWFAARTTYSGGFTKNDKGGYDRHGQKVLYGTHAVQL
TYKPHRFLVEAFYYLSPQIFNAPGIKIGWDSNPNFSGTGFRSDTAITGFFPIYYPWMIVK
SDGSPVYRYDTPATQNGQNLMIRQRFDINNYNVSIAFYKVFQNANGWIGNMGNPSGVIMS
GNSVYAGFSGTALKRDAATILLSCGGTHFAKKFTWKFATQYSNSVVSWEARAMISLAYKF
SEYLSGSVDLSYYGVHTNKGFKPGENGPVPKNFPALYSDRSALYTALIASF
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggcaagtcaggttttattctttggggcatttttaagctcttcgttacaaggt
tttgaagccaagctcaacggctttgtggatcaatccagcactatcggttttaaccagcac
aaaatcaataaagaaagaggtatctaccctatgcagcaattcgcaacgattgcgggctat
ttagggcttggttttagcctgttacccaaaaaggtttcagaccatgttctaaaaggcaaa
atagggggcatggtgggatctattttctatgacggcacgaagaagtttgaagacggatct
gtatcttacaacctctttggttattatgatgggttcatggggggttatacaaacatctta
caaaccgatagccttgaaacacagaacatgaaatacaataaaaatgtccgcaattatgtc
tttagcgatgcgtatttggaataccgctataaagatcattttgagttcaagggcgggcgc
tacctttctggcatgccttttagaagcgggcaaactcaaggctttcaagtttctgggcaa
tacaagcatgcacgcttgacttggtttagctcttttgggagggcgttcgcttatggttcg
tttttgatggattggtttgccgctaggaccacttatagcgggggctttaccaaaaacgat
aagggaggttatgatagacatgggcaaaaggtgctttatggcacgcatgcggtgcaactc
acctataaacctcatcgtttcctcgtggaggccttctattacctttcgcctcaaatcttt
aacgctccgggcattaagattggttgggactctaaccctaattttagcggcacaggcttt
cgctcagatacggccatcacagggtttttccccatttactacccctggatgatcgttaaa
tccgatgggagtccggtctatagatacgacacgccagccactcaaaacgggcagaatctc
atgatccgccaacgctttgatattaacaattacaatgtttccatcgctttttataaagtc
tttcaaaacgctaatggttggataggcaatatgggtaatccaagcggtgtgataatgtca
ggtaacagcgtgtatgctggtttttcaggcacagcccttaaaagagacgccgctaccatt
ctcctttcttgtggcggcactcattttgccaaaaaattcacatggaaattcgccacgcaa
tactccaattcagtggtctcttgggaagcaagagcgatgatctctttagcctataaattc
tctgaatatttgagcggcagcgtcgatctttcatattatggtgtgcacactaacaaaggc
tttaagccgggtgaaaacgggcctgtgcctaaaaacttccccgccctttattctgacagg
agcgcgttatacacggccctaatagcgtcattttga
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