Helicobacter pylori Shi417: HPSH417_07055
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Entry
HPSH417_07055 CDS
T02039
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hhr
Helicobacter pylori Shi417
Brite
KEGG Orthology (KO) [BR:
hhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhr03016
]
HPSH417_07055 (trmE)
Transfer RNA biogenesis [BR:
hhr03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HPSH417_07055 (trmE)
Prokaryotic type
Methyltransferases
HPSH417_07055 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmE_N
MnmE_helical
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
RsgA_GTPase
GTP_EFTU
iSTAND
Ras
ABC_tran
AAA_29
ATP_bind_1
Arf
MMR_HSR1_Xtn
ATP-synt_ab_N
FtsK_SpoIIIE
EF-G-binding_N
GCV_T
Motif
Other DBs
NCBI-ProteinID:
AFH98527
LinkDB
All DBs
Position
1452297..1453649
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AA seq
450 aa
AA seq
DB search
MNDTIAAIATPLGKGAISVIKISGNSALNILKQLTQKQDFTPRYAYVRDIFSNGVLLDKA
LVIYFKAPYSFTGEDVCEIQCHGNPLLAQNILQTCLNLGARLAKAGEFSKKAFLNHKMDL
SEIEASVQLILCEDESVLNALARQLKGELKIFIEEARGNLLKLLASSEVLIDYSEEDIPS
DFLDEVSLNLEKQIASFKDLLDFSNTQKQKSKGHALSIVGKPNAGKSSLLNAMLLEERAL
VSDIKGTTRDTIEEVIELQGHKVRLIDTAGIRESADKIERLGIEKSLKSLENCDIVLGVF
DLSKPLEKEDFNLIDTLNRAKKPCIVVLNKNDLAPKLELEILKSYLKIPYSLLETNTLNS
KACLKDLSQKISAFFPKLDTQNKLLLTSLAQKTALENAIFELQNAKNHLETLELFSYHLL
SAIESLNLLTRPYETSQMLDSMFSEFCLGK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaccatcgccgctatcgctacccctttaggcaagggagcgattagcgttatt
aaaatcagcggcaatagcgctctaaacattctcaaacaactcacccaaaaacaagacttc
acccccagatacgcttatgtgcgcgatattttttctaatggtgttttattggacaaagcg
ttagtgatttatttcaaagccccctatagtttcaccggtgaagatgtgtgcgaaatccaa
tgccatggaaacccccttttagcgcaaaatatcttacaaacttgcttgaatttgggggct
aggcttgctaaagcgggggaatttagcaaaaaagcctttttaaaccataaaatggatttg
agcgagattgaagcgagcgttcagctcatcctttgtgaggatgaaagcgttttaaacgct
ctagccaggcagcttaagggcgagttaaaaatttttattgaagaggctagaggcaatctt
ttaaagcttttggcgagctcagaagttttgattgattatagcgaagaagacattcctagc
gattttttagatgaagtgtctcttaatttagaaaaacaaatcgcctcttttaaagactta
ctggatttttctaacacgcaaaaacaaaaaagcaaagggcatgccttaagcattgttggc
aaacccaatgctggcaaaagttctttattaaacgccatgcttttagaagaaagggcttta
gtgagcgatattaaaggcacaacaagagacaccatagaagaagtcattgaattgcaaggg
cataaggtgcgcttgattgatacggctggcattagagagagtgcggataaaatagagcga
ttagggattgaaaaaagccttaaaagtttagaaaattgcgacattgttttaggcgtgttt
gatctttctaaacccctagaaaaagaagattttaaccttattgacaccctcaatcgcgct
aaaaagccttgcattgttgttttgaataaaaacgatttagcgcccaaactggagcttgaa
atcttaaaatcctatcttaaaatcccttattctttattagaaaccaacaccctaaattcc
aaggcttgtttgaaagatttgagccaaaaaatcagcgcctttttccctaaactagacact
caaaacaagctcttactcacttccctagcccaaaaaaccgccctagaaaacgccattttt
gaattgcaaaacgctaaaaaccatttagaaactttggagcttttttcttatcatctttta
agcgcgatagaaagcttgaacttgctcacccgcccttatgaaaccagccaaatgctagac
agcatgtttagcgaattttgcttaggcaaatga
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