Helicobacter pylori Shi417: HPSH417_07740
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Entry
HPSH417_07740 CDS
T02039
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hhr
Helicobacter pylori Shi417
Pathway
hhr03030
DNA replication
hhr03430
Mismatch repair
hhr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPSH417_07740
03430 Mismatch repair
HPSH417_07740
03440 Homologous recombination
HPSH417_07740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhr03032
]
HPSH417_07740
03400 DNA repair and recombination proteins [BR:
hhr03400
]
HPSH417_07740
Enzymes [BR:
hhr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPSH417_07740
DNA replication proteins [BR:
hhr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPSH417_07740
DNA repair and recombination proteins [BR:
hhr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPSH417_07740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AFH98660
LinkDB
All DBs
Position
complement(1607679..1608542)
Genome browser
AA seq
287 aa
AA seq
DB search
MSDSLLHKDIQALIARLKHQDLSLGMLEKSLSRLIYDEVNLEYLKACGLNFVETSENLIT
LKNLKTPLKDEVFSFIDLETTGSCPLKHEILEIGAVQVKGGEIINRFETLVKVKSVPDYI
TELTGIAYEDTLNAPSAHEALQELRLFLGNSVFVAHNANFDYNFLGRYFVEKLHCPLLNL
KLCTLDLSKRAILSMRYSLSFLKELLGFGIEVSHRAYADALASYKLFEICLLNLPSYIKT
TMDLIDFSKCANTLIKRPPRARHQETLSPFPLFERTKGLLNIIKATS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagcctcttgcataaagacattcaagccctaatcgctcgcttaaagcaccag
gatttaagcttaggtatgctagaaaaatcgctctctcgccttatttatgatgaagtcaat
ttggaatatttaaaagcgtgcgggcttaatttcgtagaaacgagtgaaaatttaatcacg
ctcaaaaaccttaaaaccccccttaaagatgaggttttttcctttattgatttagaaacc
accggctcttgccccctaaaacatgagattttagaaatcggagccgtgcaagtgaagggg
ggggaaatcatcaatcgttttgaaacccttgtgaaagtcaaaagcgtgcctgattatatc
actgagcttacaggcatcgcttatgaagacaccctaaacgccccaagcgcgcatgaagct
ttgcaagaattgcgcctttttttaggcaacagcgtgtttgtagcccataacgctaatttt
gattacaactttttagggcgttattttgtagaaaaattgcattgccccttattgaattta
aagctttgcactttggatttatccaaacgagccattttgtccatgcgttattctttgagc
tttttaaaagagcttttagggtttggtatagaagtcagccacagagcctatgcggacgct
ttagcgagctataagctctttgaaatatgcttattaaacttgcccagttacatcaaaacg
acgatggatttgattgatttttccaaatgcgctaacaccttgatcaaaaggcccccaaga
gccagacaccaagagaccctatcgccatttcctctttttgagaggacaaagggtttgtta
aatatcataaaagcaaccagttaa
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