Helicobacter pylori Shi417: HPSH417_07940
Help
Entry
HPSH417_07940 CDS
T02039
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hhr
Helicobacter pylori Shi417
Pathway
hhr00550
Peptidoglycan biosynthesis
hhr01100
Metabolic pathways
hhr01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hhr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HPSH417_07940
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HPSH417_07940
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hhr01011
]
HPSH417_07940
Enzymes [BR:
hhr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HPSH417_07940
Peptidoglycan biosynthesis and degradation proteins [BR:
hhr01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HPSH417_07940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AFH98696
LinkDB
All DBs
Position
complement(1646906..1648681)
Genome browser
AA seq
591 aa
AA seq
DB search
MKNLRYKLLLFVFIGFWGLLVLNLFILSVKNQEYYEKLAERNMTKKEFLVPTRGNIIDRN
HEFLATNKLVFGVFLPSGLKQKELLEKIEIIQTFFPNFSKETLLNNYQKENSLYNHNLIK
VVGFIPYTAMQPLYTKLIQTQGIFALPLDKRYYPNNALASHVLGYVGMASLQDLKDDEEN
QYSQIVGKTGVEKEYNKLLQGKVGYKIMRVNALNQELATLEVVPPSTNNHLQLSLDKRLQ
KEADKLFENKKGAILVMDAKNGELLVAGSYPEYNLNDFVGGISQDKWQKLQDDIYNPLLN
RFANALYPPGSVVKMGVGLSFLENLNITENTTIPTPPFIEVGKRKFRDWKKTGHGNSNLY
KAIRESVDVYFYKFGLEISIEKLSKTLREVGFGEKTGVDLPNEFVGIVPDNLWKLKRFNQ
DWRVGDTLITAIGQGSFLATPLQVLAYTGLIATGKLATPHFAINNKQPLKDPLNSFQKKK
LQALRVGMYEVCNHKDGTAYHSTRGSKVTLACKTGTAQVVEIAQNIVNRMKEKDMEYFHR
SHAWITAFLPYEKPKYAITILVEHGEGGSKLGGLLVEMSNKLYELGYLNQL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcttcgctataagcttttgctctttgtttttatagggttttgggggttattg
gttttaaatttatttattttaagcgttaaaaatcaagaatactatgaaaaactggccgaa
cgaaacatgactaaaaaggaatttctagtccctacaaggggtaatattatagacagaaac
catgagtttttagccactaataaattggtgtttggcgtgtttttgcctagcggattgaaa
caaaaagaacttttagaaaaaattgaaatcatccaaacatttttccctaacttttccaaa
gaaacgcttttaaacaattaccaaaaggaaaattcgctttataaccacaacctcattaaa
gtggttggcttcatcccttatactgccatgcaacctctttataccaaactcatccaaact
caaggcatttttgcgcttcccctagacaagcgctactaccctaataacgctttagcttcg
catgttttaggctatgtggggatggcaagcctgcaagatttgaaagacgatgaagagaat
caatacagccagattgtgggcaaaaccggcgttgaaaaagaatacaacaagctcttgcaa
ggcaaggtgggctataaaatcatgcgcgtcaatgcgctcaatcaagaattagccacctta
gaagtagtgccaccaagcaccaacaaccacttgcaattgagtttagacaaacgcttgcaa
aaagaagcggacaagctctttgaaaataaaaagggggctattttagtgatggatgcaaaa
aatggggaattgctcgttgcaggaagttaccctgaatacaatttgaacgattttgtaggc
gggatcagtcaagacaaatggcaaaaacttcaagatgatatttataaccccctactaaac
cgcttcgctaacgccttgtacccgccgggatctgtggttaaaatgggcgtaggcttgagc
tttttagaaaaccttaatatcacagaaaacaccaccatacccaccccgccctttattgaa
gtgggcaagcgcaaattcagagactggaaaaaaacagggcatggcaattctaatttgtat
aaagccattagggagtccgtggatgtgtatttttataagtttgggcttgaaatttctata
gaaaaactctctaaaaccttaagggaagtgggctttggggaaaaaacgggcgttgatttg
ccgaatgaatttgtggggattgtgccggataatttgtggaaactcaaacgcttcaatcaa
gattggcgcgttggggacacgctcattaccgctattgggcaaggctcttttttagccacg
cccttgcaggttttagcctacacgggactcattgctacgggcaaactggcaacgcctcat
ttcgctatcaacaacaaacaaccgctcaaagatcccctaaacagctttcaaaaaaagaag
ctccaagccttgagagtgggcatgtatgaagtgtgcaaccataaagacggcaccgcttat
cattccacgaggggttctaaggttactttagcatgtaaaaccggcaccgcgcaagtcgtg
gaaatcgctcaaaacatcgtcaatcgcatgaaagaaaaggatatggaatatttccatcga
tcccatgcgtggattaccgcctttttgccctatgaaaaacccaaatacgctatcaccatt
ttagtagaacatggggaagggggttcaaaactagggggcttgttagtggaaatgagcaac
aaactctatgagcttggctatcttaaccaattgtaa
DBGET
integrated database retrieval system
