Helicobacter pylori Shi417: HPSH417_07975
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Entry
HPSH417_07975 CDS
T02039
Name
(GenBank) putative regulatory protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
hhr
Helicobacter pylori Shi417
Brite
KEGG Orthology (KO) [BR:
hhr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hhr01011
]
HPSH417_07975
Enzymes [BR:
hhr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HPSH417_07975
Peptidoglycan biosynthesis and degradation proteins [BR:
hhr01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HPSH417_07975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
HTH_Mga
DUF928
SLT_2
Phage_lysozyme2
Motif
Other DBs
NCBI-ProteinID:
AFH98703
LinkDB
All DBs
Position
complement(1652304..1653416)
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AA seq
370 aa
AA seq
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MKCFSQKWLVFFVTRWLLLASLGHAKMAFESNIDTKALEAFGVNAGFLSQMPNALKKMNK
EEEWKKLVKRFDVNYQFIPIIKNMLIKASVPQEFLFLAMAESKFSSRAYSRKKAVGIWQF
MPSTAKELGLKVNHYIDERRDPIKSTQAAITYLKRLYKQTGEWYLVAMAYNYGLRKVQNA
IKAAGTSDIKILLDEDKKYLPKETREYIRSILSLALKFNSLDNLKDKEYLLNRGARVSLV
GVPFKRHTSLIQVAKNLNLSLETLKSYNHQFRYNILPSKDPTYTIYIPYEKLALFKQRQL
KQNKNIQASPKSPFITHVVLPKETLSSIAKRYQVSISSIQLANNLKDSNIFIHQRLIIPT
NKKLLATREF
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgttttagtcaaaaatggttggttttttttgttacccgttggcttttattggct
tctttaggccatgcgaaaatggcttttgaatccaatattgacaccaaagcgttagaggct
tttggggttaatgcgggctttttatcccaaatgccaaacgctttaaaaaaaatgaataaa
gaagaagaatggaaaaagttagtcaaaagatttgatgtgaattaccagttcatccccatc
attaaaaacatgctaataaaagcgagcgtgccgcaagaatttttatttttagccatggca
gagtctaaattttcatcaagggcttatagcaggaaaaaagcggtagggatttggcaattc
atgccaagcacggctaaagaattagggcttaaggtcaatcattacattgatgaaagaaga
gatcccattaaaagcactcaagcagctattacttacttgaaacggctctacaagcaaacc
ggggagtggtatttggtcgctatggcgtataattacggcttacgcaaggttcaaaacgcc
attaaagccgccggcacttcggacattaagattttgttagatgaagataaaaagtatctc
cctaaagagacacgagagtatatccgctccattctaagcctggcgttaaaattcaacagc
ctagacaaccttaaagataaagaatatctgctcaatcgtggggcgagggtgagtttagtg
ggcgtcccgtttaaaaggcacacttctttaatccaagtagccaaaaatttaaacttgagt
ttagaaaccttaaaatcctacaaccaccaattccgctataacattctgccttctaaagac
cccacctacaccatttatatcccttatgaaaaactcgcccttttcaaacaacgccagctc
aaacaaaataaaaacattcaagccagtccaaaaagcccttttatcacccatgtggtcttg
cctaaagaaaccttatcttctatcgctaaacgctatcaagtcagtatttctagtatccaa
ttagccaataacctcaaagattctaacatttttatccaccagcgcttaatcattcccacc
aataagaaattactcgctacaagggaattttaa
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