Candidatus Pantoea carbekii: HHS_00310
Help
Entry
HHS_00310 CDS
T02865
Symbol
dnaN
Name
(GenBank) DnaN protein
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
hhs
Candidatus Pantoea carbekii
Pathway
hhs03030
DNA replication
hhs03430
Mismatch repair
hhs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HHS_00310 (dnaN)
03430 Mismatch repair
HHS_00310 (dnaN)
03440 Homologous recombination
HHS_00310 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhs03032
]
HHS_00310 (dnaN)
03400 DNA repair and recombination proteins [BR:
hhs03400
]
HHS_00310 (dnaN)
Enzymes [BR:
hhs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HHS_00310 (dnaN)
DNA replication proteins [BR:
hhs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HHS_00310 (dnaN)
DNA repair and recombination proteins [BR:
hhs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HHS_00310 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta_3
DNA_pol3_beta
DUF61
DUF5721
Motif
Other DBs
NCBI-ProteinID:
BAO00001
UniProt:
U3U1K5
LinkDB
All DBs
Position
complement(54404..55504)
Genome browser
AA seq
366 aa
AA seq
DB search
MKFIIQREKLLRPLQQVNSLISKRQILPILGNILLQVNEGILLLTGTNLETEMVARIVLT
QEYHPGAITVSSRKFLDICRNLPEASQINLTLKGDRIIIYSYRSRFSLSTLPASDFPNIE
NWEIKIDFNLSQATLKRLIEDTSFSMANQDVRYFLNGIMFETNNNELRTVATDGHRLAIC
SQQISQVLKKHSVIIPRKGVIELVRLLNSSEKTLQIQIGSSKIRACIDEFIFTCKLVDGS
FPDYRHVLLNNADKILEINCELLKKAFTRVSILSNEKFRSVNIHIIKNQLKITANNLEHE
KAEEILDIHYVGEELEISFNINYLLDVLNTLKCKTVRLSLTDSASSMQIEDAINPVSTYV
IMPMRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttattatacagcgcgaaaaattattaagacctttgcaacaagttaatagttta
attagcaaacgtcaaattttgccaatccttggcaatatattgcttcaggtaaatgaaggc
atactattattaactggcactaatttagaaacagaaatggttgcacgtatcgtattaacc
caagagtatcatccaggagctattacggtatcttctcgcaaatttcttgacatttgccgt
aatctacctgaagcatcacaaattaatctaactttaaaaggtgatcgtataataatttat
tcttaccgtagccgtttttcactttctacattacctgctagtgactttcctaatatagaa
aattgggaaattaaaatagattttaatctttcccaggcaacgttaaagcgtcttattgaa
gatacatctttttctatggcaaatcaggatgtacgttactttctaaatggtataatgttt
gaaactaataataatgagttgcgtactgtagcgaccgatggacaccgtttagccatttgt
tcacagcagatttcgcaggtattaaaaaaacattctgtaataataccacgtaaaggtgtg
attgaactagtacgcttacttaatagcagtgaaaaaacgttgcaaatacagattggtagt
agtaaaatacgcgcttgtatcgatgagtttatctttacatgtaaattagtcgatgggtcc
tttcctgactatcgtcatgtattattgaacaatgcagataaaatattagaaataaactgt
gaattattgaaaaaagcatttactcgagtatcaattttatcaaatgaaaaatttcgcagt
gtaaatattcatataattaaaaatcagcttaaaattactgctaataatttagaacacgaa
aaagcagaagaaatattagatattcattatgtaggagaagaattagaaatttcgtttaat
attaattatttactagatgtattaaatacattaaaatgtaaaactgtacgtttatcgcta
actgattctgcttcaagcatgcaaatagaagatgctattaacccagtttcgacttacgtt
attatgccaatgagattatag
DBGET
integrated database retrieval system
