Candidatus Pantoea carbekii: HHS_00370
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Entry
HHS_00370 CDS
T02865
Symbol
trmE
Name
(GenBank) TrmE protein
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hhs
Candidatus Pantoea carbekii
Brite
KEGG Orthology (KO) [BR:
hhs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhs03016
]
HHS_00370 (trmE)
Transfer RNA biogenesis [BR:
hhs03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HHS_00370 (trmE)
Prokaryotic type
Methyltransferases
HHS_00370 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Ras
Roc
SRPRB
AAA_18
Dynamin_N
RsgA_GTPase
cobW
AAA_28
Arf
AIG1
AAA_24
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BAO00007
UniProt:
U3U6Q9
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All DBs
Position
59961..61310
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AA seq
449 aa
AA seq
DB search
MIDTIAAQATPAGHGGVGILRISGKKSAQVAKAVLGKLPNPRYAHYLAFYDAHGNIIDKG
IVLWFPGPHSFTGEDVLELQGHGGPIILDLLLKRIIAIPDIRIANPGEFLERAFLNGKLD
LAQAEAVSDLIYANSERAAHAAVNSLQGAFSIRVNAMVETLTNLRAYVETAIDFVDEEIN
FLSIDEIKEQLNKIIDQLNTTRSIAHKGSLLREGMKVVIAGYPNSGKSSLLNRLTGRETA
IVTNFAGTTRDVLREHICLDGITLHIADTAGLRETSDPIEEIGIERAWKEIIQADHVLFM
VDANITNINIWPDFITRLPTQLPVMLIRNKADMTGEPIGLRKLNNRVFISLSVSTGEGID
ILCNYLKQAIETPNNNIEGDFLARRRHLHALDLANTYLKQCQEQLFEGFSVELLAENLRS
AQLSLNEITGKFTSNNLLKRIFSTFCIGK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgatagatactattgccgctcaagccactcctgcagggcatggcggtgttggaattctg
cgtatttctggtaaaaaatcagctcaggtagcaaaagctgtattaggaaaattaccaaat
ccacgttatgcgcactatttagcgttttatgatgcccatggtaatataattgataaaggt
attgttctgtggtttccgggtccacactcctttactggtgaagacgtactagaattacaa
gggcatggtgggcctatcatactcgatttattactaaaacgtattatagcaatacctgat
attcgtattgctaatccaggagagtttttagagcgcgcttttctgaatggtaagttggac
ttggcacaggcagaagctgtttcggatctaatatatgctaattctgaaagagcagcacat
gctgcagttaattcactgcagggagcattttctatccgtgttaatgcaatggtagaaact
cttaccaatttacgtgcttatgtagaaactgctattgattttgtagatgaagaaatcaat
tttttatctatcgatgaaattaaagaacagttaaataaaattattgatcaacttaatact
acacgtagtatagcgcataaaggtagtttgttacgtgaaggaatgaaagtagtaattgcc
ggatatcctaattccggaaaatccagtcttttaaatagattaactggtcgtgaaaccgct
attgtgaccaattttgctggaactactcgggatgtactgcgagaacatatttgtcttgat
ggaatcacattacatattgctgatacagcaggtttacgcgagactagtgatccaatagaa
gagattggtattgaacgtgcttggaaagaaataatacaagctgatcatgtattatttatg
gttgatgcaaatattactaatattaatatttggcccgattttataacacgtttaccaacg
cagctaccagttatgctaattcgtaataaagcagacatgactggtgaaccaattggattg
aggaaattaaataatcgtgtatttattagtttgtctgtaagtacaggggagggtatagac
atactttgcaattaccttaaacaagctatagaaactcctaacaataatatagagggtgat
tttttagcacgtcgccgccatttacacgctttagatttagcaaatacttatttaaaacaa
tgccaagaacaacttttcgaaggtttttcagttgaattattagcagaaaatttacgcagt
gcacaattatcacttaatgaaattactggaaaatttacatctaataatttactaaaacgt
attttctcaaccttttgcattggtaagtaa
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