Candidatus Pantoea carbekii: HHS_00670
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Entry
HHS_00670 CDS
T02865
Name
(GenBank) transcriptional regulator HU subunit alpha
KO
K05787
DNA-binding protein HU-alpha
Organism
hhs
Candidatus Pantoea carbekii
Brite
KEGG Orthology (KO) [BR:
hhs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhs03032
]
HHS_00670
03036 Chromosome and associated proteins [BR:
hhs03036
]
HHS_00670
03400 DNA repair and recombination proteins [BR:
hhs03400
]
HHS_00670
DNA replication proteins [BR:
hhs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HHS_00670
Chromosome and associated proteins [BR:
hhs03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HHS_00670
DNA repair and recombination proteins [BR:
hhs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HHS_00670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
BAO00037
UniProt:
U3U6S8
LinkDB
All DBs
Position
99251..99523
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTQLIDIIAEKAGLSKIQAKAALESILAAITESLKDGDPVQLIGFGTFKVKYRAKRTG
RNPQTGEKIQIAETHIPSFASGKKLKNSIK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataagactcaattgattgacatcatagcagaaaaagcaggcttgtccaaaattcag
gctaaagctgcacttgaatctatcttggctgcaattactgagtctctcaaggatggtgat
ccagtgcaacttattggttttggtacgtttaaagtcaaatatcgcgctaaacggactggg
cgaaatccccaaactggtgaaaaaattcaaattgctgaaacacatataccgtcatttgca
tccggtaaaaaattaaagaattcaattaaataa
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