Candidatus Pantoea carbekii: HHS_00910
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Entry
HHS_00910 CDS
T02865
Symbol
rfaG
Name
(GenBank) RfaG protein
KO
K02844
UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
Organism
hhs
Candidatus Pantoea carbekii
Pathway
hhs00540
Lipopolysaccharide biosynthesis
hhs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hhs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HHS_00910 (rfaG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hhs01005
]
HHS_00910 (rfaG)
Lipopolysaccharide biosynthesis proteins [BR:
hhs01005
]
Core region
HHS_00910 (rfaG)
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GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_1_2
GT4-conflict
Motif
Other DBs
NCBI-ProteinID:
BAO00061
UniProt:
U3U1Q8
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All DBs
Position
complement(128127..129263)
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AA seq
378 aa
AA seq
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MNKLRLAIVRQQYRLDGGAERFISRTLQALRNEKINFNIITRKWKNTNLYPLLNLHICNP
IKLGRLSREYGFACAARKCWEREKFDIVQSHERIAGCDIFRAGDGVHRVWLEERARISRT
SWKQFNTYLSPYHHYVLQAEKHLFNAPSLKAVICNSNMVKKNILRFFSLNAEKIHVIYNP
IDSEKFQPAMEITRYRSRQILNLPLNSTVMIYVGSGFERKGLKVAIEAISNSDRYLIIVG
QDKNFSFYQQLANQLHCLARLRFVGIQQDVRPFYHAADALLLPTFYDPFPNVVLEAMACG
LAIITSTNCGGAELINIGQEGFVCNTFDIKSLNEAILATPSRTDNSTMGDAARQKIQFLT
PERFAKLLSSLYQKVINV
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaattacgtttagcaattgtgagacagcagtatagattagatggaggtgcagag
cgatttatttcacgtactctacaagcacttagaaatgaaaaaataaattttaatatcatt
acgcgtaaatggaaaaacacaaacttatatccattgttaaacttacatatttgcaatcca
attaaacttggacggctatcacgcgaatatgggtttgcatgcgctgcacgaaaatgctgg
gaacgtgaaaaattcgatattgtacaaagtcatgaacgtattgctggatgtgatatcttt
cgtgcaggagatggtgtacatcgcgtctggcttgaagaaagagcacgtattagtagaact
tcatggaaacaatttaatacatacttaagtccttatcatcattatgttcttcaagctgaa
aaacacttgtttaatgcaccatcactaaaagcagtgatttgtaattcaaatatggttaaa
aaaaacattttgcgttttttttcattaaatgctgaaaaaattcatgtcatttataatcct
atcgatagtgaaaaatttcaaccggctatggaaataacacgttatcgttcacgtcaaata
ttaaatcttccactaaattctactgtaatgatttatgttggttcagggtttgaacgtaaa
ggtttaaaagtagccattgaagccatttcgaacagcgatagatatttaataatagtagga
caggataaaaatttttctttttatcaacaattagcaaatcaacttcattgtttggctcgt
ctacgttttgtaggcatacaacaagatgtacgaccattttatcatgcggcagatgcgcta
ctattacctacattttatgatccgtttccgaacgttgtattagaagcaatggcttgcggt
ttagcaattattaccagcactaactgcggaggtgcagagcttatcaacattggtcaagaa
ggctttgtttgtaatacattcgacattaaatctttaaacgaagcaatattagcgacacca
tcacgtacagataattctacaatgggtgatgcagcacgtcaaaaaattcaatttttaaca
ccagagcgatttgctaaattactaagctcgctttaccaaaaagttattaatgtttga
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