Candidatus Pantoea carbekii: HHS_03770
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Entry
HHS_03770 CDS
T02865
Symbol
truB
Name
(GenBank) TruB protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hhs
Candidatus Pantoea carbekii
Brite
KEGG Orthology (KO) [BR:
hhs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhs03016
]
HHS_03770 (truB)
Enzymes [BR:
hhs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HHS_03770 (truB)
Transfer RNA biogenesis [BR:
hhs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HHS_03770 (truB)
Prokaryotic type
HHS_03770 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BAO00347
UniProt:
U3U7H0
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All DBs
Position
509704..510534
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AA seq
276 aa
AA seq
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MIDPHSNSHKIHGILLIDKQQGVSSNTVLQKVKRLFNIRKAGHTGALDPLATGMLPICLG
DATKFSQYLINSDKRYRVIARLGESTDTFDADGSIINTRFVAVTQNKLKIALESFRGSIL
QVPPMFSALKYRGRPLYEYARKQIKVERAARPIFIYELLLIRWKSNELELEIHCSKGTYI
RSIIDDLGEKLGCGAHVTMLRRLQVSHYTTEKMVTLKKLQELVHNANIHSISSLIVLNPF
LLPMDSLVANCPEIHLQKSLPKDSRANSSRDGSVNC
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatcctcatagtaacagtcataaaatccatggtatattattaatagacaaacag
caaggtgtttcgtctaatactgttttacaaaaagtaaaacgtttgtttaatattagaaaa
gccggtcacacaggcgcactggatccattggcgactggcatgttaccaatttgtttgggg
gacgctacaaaattttcccaatatcttattaattcagataaacgttaccgtgttatcgct
cgcctgggagaaagcactgatacttttgatgctgatggtagtataatcaatacacgtttt
gttgcagtgactcaaaataaattgaaaatagctttagaaagttttcgtggtagtatatta
caggtcccaccgatgttttcagcacttaaatatcgcgggcgtccattgtatgaatatgca
cgtaaacaaataaaagtagaacgtgcagcacgtccgatttttatatatgaactattatta
attcgatggaaatctaatgaattagaattagaaatccattgttctaagggaacttatatt
cgtagtattattgatgatttaggtgaaaagctaggttgtggagctcacgtcactatgcta
cgccgtttacaagtatctcattacacaacggaaaaaatggttacattaaaaaagttacaa
gagttggttcataacgctaatattcattcaatttcatctttaattgtactaaatccattt
ctgcttcctatggatagtttagttgcaaactgtccagaaatacatttacagaagagttta
ccaaaggacagtagagcaaatagcagcagagatggctctgtaaattgttaa
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